Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC7.01□□□□□ -1.29
NEK3P51956 AC063955.1-201ENST00000462872 685 ntBASIC7.01□□□□□ -1.29
NEK3P51956 PPP1R2P6-201ENST00000478565 588 ntBASIC7.01□□□□□ -1.29
NEK3P51956 RPS4XP17-201ENST00000479057 754 ntBASIC7.01□□□□□ -1.29
NEK3P51956 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NEK3P51956 AC113191.1-201ENST00000517759 403 ntBASIC7.01□□□□□ -1.29
NEK3P51956 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC7.01□□□□□ -1.29
NEK3P51956 ACER3-213ENST00000533873 929 ntTSL 2 BASIC7.01□□□□□ -1.29
NEK3P51956 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
NEK3P51956 MRPS21P9-201ENST00000571150 257 ntBASIC7.01□□□□□ -1.29
NEK3P51956 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC7.01□□□□□ -1.29
NEK3P51956 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC7.01□□□□□ -1.29
NEK3P51956 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC7.01□□□□□ -1.29
NEK3P51956 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC7.01□□□□□ -1.29
NEK3P51956 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC7.01□□□□□ -1.29
NEK3P51956 AC015922.4-201ENST00000612568 690 ntBASIC7.01□□□□□ -1.29
NEK3P51956 MRPL57P3-201ENST00000619218 176 ntBASIC7.01□□□□□ -1.29
NEK3P51956 AP005212.3-201ENST00000619964 528 ntBASIC7.01□□□□□ -1.29
NEK3P51956 AL356490.1-201ENST00000623079 479 ntBASIC7.01□□□□□ -1.29
NEK3P51956 AP000720.1-201ENST00000625091 483 ntBASIC7.01□□□□□ -1.29
NEK3P51956 AL354702.2-202ENST00000641481 890 ntBASIC7.01□□□□□ -1.29
NEK3P51956 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
NEK3P51956 AC034229.2-201ENST00000566945 2508 ntBASIC7.01□□□□□ -1.29
NEK3P51956 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NEK3P51956 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC7.01□□□□□ -1.29
NEK3P51956 JPX-212ENST00000639185 9658 ntTSL 5 BASIC7.01□□□□□ -1.29
NEK3P51956 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NEK3P51956 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC7.01□□□□□ -1.29
NEK3P51956 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
NEK3P51956 NEK2P4-201ENST00000425793 1329 ntBASIC7.01□□□□□ -1.29
NEK3P51956 AL512310.3-201ENST00000547023 1335 ntBASIC7.01□□□□□ -1.29
NEK3P51956 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC7.01□□□□□ -1.29
NEK3P51956 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC7□□□□□ -1.29
NEK3P51956 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
NEK3P51956 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC7□□□□□ -1.29
NEK3P51956 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
NEK3P51956 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
NEK3P51956 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC7□□□□□ -1.29
NEK3P51956 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC7□□□□□ -1.29
NEK3P51956 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
NEK3P51956 ATP5BP1-201ENST00000411980 1574 ntBASIC7□□□□□ -1.29
NEK3P51956 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
NEK3P51956 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
NEK3P51956 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
NEK3P51956 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
NEK3P51956 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
NEK3P51956 MGP-201ENST00000228938 694 ntTSL 3 BASIC7□□□□□ -1.29
NEK3P51956 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC7□□□□□ -1.29
NEK3P51956 OR10D1P-201ENST00000355343 936 ntBASIC7□□□□□ -1.29
NEK3P51956 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC7□□□□□ -1.29
NEK3P51956 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC7□□□□□ -1.29
NEK3P51956 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC7□□□□□ -1.29
NEK3P51956 LDHAP5-201ENST00000394996 622 ntBASIC7□□□□□ -1.29
NEK3P51956 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
NEK3P51956 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC7□□□□□ -1.29
NEK3P51956 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC7□□□□□ -1.29
NEK3P51956 RNF19BPX-201ENST00000426224 625 ntBASIC7□□□□□ -1.29
NEK3P51956 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC7□□□□□ -1.29
NEK3P51956 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC7□□□□□ -1.29
NEK3P51956 BUD31P2-201ENST00000449374 300 ntBASIC7□□□□□ -1.29
NEK3P51956 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC7□□□□□ -1.29
NEK3P51956 RN7SL790P-201ENST00000474043 298 ntBASIC7□□□□□ -1.29
NEK3P51956 RN7SL655P-201ENST00000486087 298 ntBASIC7□□□□□ -1.29
NEK3P51956 RN7SL350P-201ENST00000492591 299 ntBASIC7□□□□□ -1.29
NEK3P51956 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC7□□□□□ -1.29
NEK3P51956 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC7□□□□□ -1.29
NEK3P51956 AP005902.2-201ENST00000518393 307 ntBASIC7□□□□□ -1.29
NEK3P51956 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC7□□□□□ -1.29
NEK3P51956 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC7□□□□□ -1.29
NEK3P51956 AP000662.1-201ENST00000530952 487 ntBASIC7□□□□□ -1.29
NEK3P51956 AC007537.1-201ENST00000539347 327 ntBASIC7□□□□□ -1.29
NEK3P51956 DPPA3P2-201ENST00000553589 478 ntBASIC7□□□□□ -1.29
NEK3P51956 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC7□□□□□ -1.29
NEK3P51956 AC130324.2-201ENST00000580873 638 ntTSL 2 BASIC7□□□□□ -1.29
NEK3P51956 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC7□□□□□ -1.29
NEK3P51956 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC7□□□□□ -1.29
NEK3P51956 IGKV2OR2-7-201ENST00000604652 304 ntBASIC7□□□□□ -1.29
NEK3P51956 5S_rRNA.23-201ENST00000612086 102 ntBASIC7□□□□□ -1.29
NEK3P51956 AC074276.2-201ENST00000619891 348 ntBASIC7□□□□□ -1.29
NEK3P51956 LINC00216-201ENST00000623548 1126 ntBASIC7□□□□□ -1.29
NEK3P51956 AC011471.4-201ENST00000638271 216 ntBASIC7□□□□□ -1.29
NEK3P51956 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
NEK3P51956 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC7□□□□□ -1.29
NEK3P51956 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
NEK3P51956 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
NEK3P51956 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC7□□□□□ -1.29
NEK3P51956 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
NEK3P51956 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
NEK3P51956 AC245100.2-201ENST00000454544 1679 ntBASIC7□□□□□ -1.29
NEK3P51956 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC7□□□□□ -1.29
NEK3P51956 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
NEK3P51956 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
NEK3P51956 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
NEK3P51956 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.99□□□□□ -1.29
NEK3P51956 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.99□□□□□ -1.29
NEK3P51956 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
NEK3P51956 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC6.99□□□□□ -1.29
NEK3P51956 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
NEK3P51956 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC6.99□□□□□ -1.29
NEK3P51956 RN7SKP189-201ENST00000365042 330 ntBASIC6.99□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms