Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
LHX1P48742 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
LHX1P48742 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.83□□□□□ -1.32
LHX1P48742 DHFRP2-201ENST00000414224 547 ntBASIC6.83□□□□□ -1.32
LHX1P48742 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.83□□□□□ -1.32
LHX1P48742 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
LHX1P48742 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.83□□□□□ -1.32
LHX1P48742 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.83□□□□□ -1.32
LHX1P48742 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC6.83□□□□□ -1.32
LHX1P48742 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.83□□□□□ -1.32
LHX1P48742 RN7SL168P-201ENST00000463821 279 ntBASIC6.83□□□□□ -1.32
LHX1P48742 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.83□□□□□ -1.32
LHX1P48742 AC092824.1-201ENST00000483524 576 ntBASIC6.83□□□□□ -1.32
LHX1P48742 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
LHX1P48742 IGKV1D-22-201ENST00000518953 324 ntBASIC6.83□□□□□ -1.32
LHX1P48742 IGHV4-55-201ENST00000520889 368 ntBASIC6.83□□□□□ -1.32
LHX1P48742 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC6.83□□□□□ -1.32
LHX1P48742 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC6.83□□□□□ -1.32
LHX1P48742 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.83□□□□□ -1.32
LHX1P48742 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.83□□□□□ -1.32
LHX1P48742 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC6.83□□□□□ -1.32
LHX1P48742 AC023310.2-201ENST00000553844 547 ntBASIC6.83□□□□□ -1.32
LHX1P48742 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.83□□□□□ -1.32
LHX1P48742 AC244034.2-201ENST00000562504 509 ntBASIC6.83□□□□□ -1.32
LHX1P48742 AC005632.2-201ENST00000564271 828 ntBASIC6.83□□□□□ -1.32
LHX1P48742 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
LHX1P48742 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.83□□□□□ -1.32
LHX1P48742 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC6.83□□□□□ -1.32
LHX1P48742 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC6.83□□□□□ -1.32
LHX1P48742 AL591926.1-201ENST00000620542 217 ntBASIC6.83□□□□□ -1.32
LHX1P48742 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.83□□□□□ -1.32
LHX1P48742 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.83□□□□□ -1.32
LHX1P48742 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.83□□□□□ -1.32
LHX1P48742 CASC19-274ENST00000642018 970 ntBASIC6.83□□□□□ -1.32
LHX1P48742 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
LHX1P48742 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
LHX1P48742 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.83□□□□□ -1.32
LHX1P48742 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
LHX1P48742 AP002370.1-201ENST00000528055 1602 ntBASIC6.83□□□□□ -1.32
LHX1P48742 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC6.83□□□□□ -1.32
LHX1P48742 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.82□□□□□ -1.32
LHX1P48742 AC123912.3-201ENST00000600907 1367 ntBASIC6.82□□□□□ -1.32
LHX1P48742 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
LHX1P48742 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
LHX1P48742 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.82□□□□□ -1.32
LHX1P48742 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
LHX1P48742 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
LHX1P48742 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
LHX1P48742 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
LHX1P48742 AC092821.3-202ENST00000641304 2767 ntBASIC6.82□□□□□ -1.32
LHX1P48742 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.82□□□□□ -1.32
LHX1P48742 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
LHX1P48742 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
LHX1P48742 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC6.82□□□□□ -1.32
LHX1P48742 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
LHX1P48742 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.82□□□□□ -1.32
LHX1P48742 LPAL2-203ENST00000454031 2498 ntBASIC6.82□□□□□ -1.32
LHX1P48742 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
LHX1P48742 AL139805.1-201ENST00000407837 289 ntBASIC6.82□□□□□ -1.32
LHX1P48742 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.82□□□□□ -1.32
LHX1P48742 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.82□□□□□ -1.32
LHX1P48742 RPL24P2-201ENST00000421023 475 ntBASIC6.82□□□□□ -1.32
LHX1P48742 FABP5P1-201ENST00000423401 411 ntBASIC6.82□□□□□ -1.32
LHX1P48742 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.82□□□□□ -1.32
LHX1P48742 GTF2IP14-201ENST00000441415 586 ntBASIC6.82□□□□□ -1.32
LHX1P48742 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC6.82□□□□□ -1.32
LHX1P48742 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.82□□□□□ -1.32
LHX1P48742 AC093166.3-201ENST00000448785 303 ntBASIC6.82□□□□□ -1.32
LHX1P48742 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.82□□□□□ -1.32
LHX1P48742 AC118758.1-202ENST00000454719 225 ntBASIC6.82□□□□□ -1.32
LHX1P48742 RARRES2P3-201ENST00000457739 473 ntBASIC6.82□□□□□ -1.32
LHX1P48742 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC6.82□□□□□ -1.32
LHX1P48742 AC122718.2-201ENST00000505325 591 ntBASIC6.82□□□□□ -1.32
LHX1P48742 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC6.82□□□□□ -1.32
LHX1P48742 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.82□□□□□ -1.32
LHX1P48742 KHDC1P1-201ENST00000511053 508 ntBASIC6.82□□□□□ -1.32
LHX1P48742 AC084337.1-201ENST00000524809 686 ntBASIC6.82□□□□□ -1.32
LHX1P48742 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC6.82□□□□□ -1.32
LHX1P48742 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.82□□□□□ -1.32
LHX1P48742 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.82□□□□□ -1.32
LHX1P48742 MIR3154-201ENST00000577829 84 ntBASIC6.82□□□□□ -1.32
LHX1P48742 MIR7109-201ENST00000613748 65 ntBASIC6.82□□□□□ -1.32
LHX1P48742 MIR6806-201ENST00000622141 64 ntBASIC6.82□□□□□ -1.32
LHX1P48742 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
LHX1P48742 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
LHX1P48742 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
LHX1P48742 AP003486.1-201ENST00000525716 3994 ntBASIC6.82□□□□□ -1.32
LHX1P48742 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC6.82□□□□□ -1.32
LHX1P48742 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
LHX1P48742 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
LHX1P48742 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC6.81□□□□□ -1.32
LHX1P48742 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.81□□□□□ -1.32
LHX1P48742 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
LHX1P48742 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC6.81□□□□□ -1.32
LHX1P48742 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
LHX1P48742 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
LHX1P48742 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
LHX1P48742 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.81□□□□□ -1.32
LHX1P48742 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
LHX1P48742 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms