Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 RPL3P13-201ENST00000550415 216 ntBASIC6.36□□□□□ -1.39
SHMT2P34897 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC6.36□□□□□ -1.39
SHMT2P34897 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.36□□□□□ -1.39
SHMT2P34897 AC025283.1-201ENST00000572039 734 ntBASIC6.36□□□□□ -1.39
SHMT2P34897 AL953862.2-201ENST00000603089 820 ntBASIC6.36□□□□□ -1.39
SHMT2P34897 AC004805.3-201ENST00000603178 310 ntBASIC6.36□□□□□ -1.39
SHMT2P34897 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC6.36□□□□□ -1.39
SHMT2P34897 AC068726.1-201ENST00000610993 341 ntBASIC6.36□□□□□ -1.39
SHMT2P34897 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC6.36□□□□□ -1.39
SHMT2P34897 GAPDHP41-201ENST00000613707 975 ntBASIC6.36□□□□□ -1.39
SHMT2P34897 AC073488.9-201ENST00000631601 754 ntBASIC6.36□□□□□ -1.39
SHMT2P34897 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
SHMT2P34897 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
SHMT2P34897 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SHMT2P34897 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.36□□□□□ -1.39
SHMT2P34897 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
SHMT2P34897 AL161901.1-201ENST00000624954 3425 ntBASIC6.36□□□□□ -1.39
SHMT2P34897 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.36□□□□□ -1.39
SHMT2P34897 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.36□□□□□ -1.39
SHMT2P34897 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.36□□□□□ -1.39
SHMT2P34897 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC6.36□□□□□ -1.39
SHMT2P34897 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
SHMT2P34897 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SHMT2P34897 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.35□□□□□ -1.39
SHMT2P34897 AC023245.2-201ENST00000530760 2978 ntBASIC6.35□□□□□ -1.39
SHMT2P34897 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
SHMT2P34897 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SHMT2P34897 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SHMT2P34897 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SHMT2P34897 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.35□□□□□ -1.39
SHMT2P34897 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SHMT2P34897 RPL5P20-201ENST00000403848 896 ntBASIC6.35□□□□□ -1.39
SHMT2P34897 RN7SKP221-201ENST00000410420 301 ntBASIC6.35□□□□□ -1.39
SHMT2P34897 RPS14P4-201ENST00000415880 418 ntBASIC6.35□□□□□ -1.39
SHMT2P34897 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SHMT2P34897 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC6.35□□□□□ -1.39
SHMT2P34897 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
SHMT2P34897 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.35□□□□□ -1.39
SHMT2P34897 AC003989.1-201ENST00000434569 565 ntBASIC6.35□□□□□ -1.39
SHMT2P34897 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC6.35□□□□□ -1.39
SHMT2P34897 AC245291.3-201ENST00000443400 292 ntBASIC6.35□□□□□ -1.39
SHMT2P34897 AC092601.1-201ENST00000444526 383 ntBASIC6.35□□□□□ -1.39
SHMT2P34897 RBMY2HP-201ENST00000457961 720 ntBASIC6.35□□□□□ -1.39
SHMT2P34897 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.35□□□□□ -1.39
SHMT2P34897 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.35□□□□□ -1.39
SHMT2P34897 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.35□□□□□ -1.39
SHMT2P34897 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SHMT2P34897 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
SHMT2P34897 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC6.35□□□□□ -1.39
SHMT2P34897 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.35□□□□□ -1.39
SHMT2P34897 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.35□□□□□ -1.39
SHMT2P34897 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
SHMT2P34897 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.35□□□□□ -1.39
SHMT2P34897 WBP1LP11-201ENST00000586141 328 ntBASIC6.35□□□□□ -1.39
SHMT2P34897 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC6.35□□□□□ -1.39
SHMT2P34897 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC6.35□□□□□ -1.39
SHMT2P34897 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC6.35□□□□□ -1.39
SHMT2P34897 AL589743.6-201ENST00000611025 117 ntBASIC6.35□□□□□ -1.39
SHMT2P34897 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.35□□□□□ -1.39
SHMT2P34897 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SHMT2P34897 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC6.35□□□□□ -1.39
SHMT2P34897 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.35□□□□□ -1.39
SHMT2P34897 SNX18P3-202ENST00000565670 1750 ntBASIC6.35□□□□□ -1.39
SHMT2P34897 AC010329.1-201ENST00000593903 8328 ntBASIC6.35□□□□□ -1.39
SHMT2P34897 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SHMT2P34897 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SHMT2P34897 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SHMT2P34897 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SHMT2P34897 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
SHMT2P34897 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.35□□□□□ -1.39
SHMT2P34897 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SHMT2P34897 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SHMT2P34897 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SHMT2P34897 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
SHMT2P34897 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
SHMT2P34897 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SHMT2P34897 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC6.34□□□□□ -1.39
SHMT2P34897 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SHMT2P34897 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.34□□□□□ -1.39
SHMT2P34897 AC078880.4-201ENST00000617627 1749 ntBASIC6.34□□□□□ -1.39
SHMT2P34897 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SHMT2P34897 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
SHMT2P34897 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.34□□□□□ -1.39
SHMT2P34897 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SHMT2P34897 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SHMT2P34897 SNORA64.3-201ENST00000365647 134 ntBASIC6.34□□□□□ -1.39
SHMT2P34897 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SHMT2P34897 RN7SKP38-201ENST00000410782 309 ntBASIC6.34□□□□□ -1.39
SHMT2P34897 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC6.34□□□□□ -1.39
SHMT2P34897 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.34□□□□□ -1.39
SHMT2P34897 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC6.34□□□□□ -1.39
SHMT2P34897 SMARCE1P1-201ENST00000417747 1186 ntBASIC6.34□□□□□ -1.39
SHMT2P34897 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC6.34□□□□□ -1.39
SHMT2P34897 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.34□□□□□ -1.39
SHMT2P34897 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC6.34□□□□□ -1.39
SHMT2P34897 RPS7P10-201ENST00000464254 603 ntBASIC6.34□□□□□ -1.39
SHMT2P34897 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC6.34□□□□□ -1.39
SHMT2P34897 RPL17P2-201ENST00000491913 451 ntBASIC6.34□□□□□ -1.39
SHMT2P34897 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC6.34□□□□□ -1.39
SHMT2P34897 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms