Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.94□□□□□ -1.46
SPTA1P02549 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC5.94□□□□□ -1.46
SPTA1P02549 AL355483.4-201ENST00000432653 470 ntTSL 3 BASIC5.94□□□□□ -1.46
SPTA1P02549 AC139272.1-201ENST00000505516 640 ntBASIC5.94□□□□□ -1.46
SPTA1P02549 AC131392.1-201ENST00000506490 633 ntBASIC5.94□□□□□ -1.46
SPTA1P02549 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.94□□□□□ -1.46
SPTA1P02549 AL133399.1-201ENST00000527476 298 ntBASIC5.94□□□□□ -1.46
SPTA1P02549 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.94□□□□□ -1.46
SPTA1P02549 AL035422.2-201ENST00000603059 565 ntBASIC5.94□□□□□ -1.46
SPTA1P02549 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
SPTA1P02549 LINC01877-203ENST00000439734 2287 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SPTA1P02549 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SPTA1P02549 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
SPTA1P02549 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
SPTA1P02549 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC5.94□□□□□ -1.46
SPTA1P02549 AC104837.1-201ENST00000444644 1587 ntBASIC5.94□□□□□ -1.46
SPTA1P02549 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SPTA1P02549 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
SPTA1P02549 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC5.94□□□□□ -1.46
SPTA1P02549 PTP4A2-218ENST00000602725 3353 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SPTA1P02549 TSC22D1-212ENST00000611198 2877 ntTSL 2 BASIC5.94□□□□□ -1.46
SPTA1P02549 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
SPTA1P02549 AC244452.1-201ENST00000413798 141 ntBASIC5.94□□□□□ -1.46
SPTA1P02549 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SPTA1P02549 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SPTA1P02549 AC108161.1-201ENST00000461060 402 ntBASIC5.94□□□□□ -1.46
SPTA1P02549 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.94□□□□□ -1.46
SPTA1P02549 MIR3135A-201ENST00000578460 77 ntBASIC5.94□□□□□ -1.46
SPTA1P02549 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.94□□□□□ -1.46
SPTA1P02549 AP000864.1-201ENST00000609424 650 ntBASIC5.94□□□□□ -1.46
SPTA1P02549 AC004801.6-201ENST00000616571 978 ntBASIC5.94□□□□□ -1.46
SPTA1P02549 AL512652.1-201ENST00000619006 500 ntBASIC5.94□□□□□ -1.46
SPTA1P02549 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.94□□□□□ -1.46
SPTA1P02549 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
SPTA1P02549 GCNT2-216ENST00000495262 2214 ntAPPRIS ALT1 TSL 2 BASIC5.94□□□□□ -1.46
SPTA1P02549 AC110597.1-201ENST00000562669 3176 ntBASIC5.94□□□□□ -1.46
SPTA1P02549 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
SPTA1P02549 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
SPTA1P02549 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SPTA1P02549 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC5.93□□□□□ -1.46
SPTA1P02549 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SPTA1P02549 AC007066.2-201ENST00000561961 1993 ntTSL 2 BASIC5.93□□□□□ -1.46
SPTA1P02549 LINC01427-204ENST00000635299 1978 ntTSL 5 BASIC5.93□□□□□ -1.46
SPTA1P02549 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.93□□□□□ -1.46
SPTA1P02549 LINC02324-201ENST00000531609 1442 ntTSL 2 BASIC5.93□□□□□ -1.46
SPTA1P02549 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
SPTA1P02549 AURKA-203ENST00000371356 2112 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SPTA1P02549 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
SPTA1P02549 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.93□□□□□ -1.46
SPTA1P02549 RPL5P6-201ENST00000425640 886 ntBASIC5.93□□□□□ -1.46
SPTA1P02549 AC006455.6-201ENST00000426192 893 ntBASIC5.93□□□□□ -1.46
SPTA1P02549 EIF2S2P3-201ENST00000428356 999 ntBASIC5.93□□□□□ -1.46
SPTA1P02549 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.93□□□□□ -1.46
SPTA1P02549 LINC00960-202ENST00000492922 2126 ntTSL 2 BASIC5.93□□□□□ -1.46
SPTA1P02549 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.93□□□□□ -1.46
SPTA1P02549 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC5.93□□□□□ -1.46
SPTA1P02549 MIAT_exon5_1.1-201ENST00000618919 149 ntBASIC5.93□□□□□ -1.46
SPTA1P02549 AC004943.1-203ENST00000624370 1074 ntBASIC5.93□□□□□ -1.46
SPTA1P02549 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC5.93□□□□□ -1.46
SPTA1P02549 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SPTA1P02549 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC5.93□□□□□ -1.46
SPTA1P02549 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
SPTA1P02549 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
SPTA1P02549 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.93□□□□□ -1.46
SPTA1P02549 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC5.93□□□□□ -1.46
SPTA1P02549 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SPTA1P02549 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC5.93□□□□□ -1.46
SPTA1P02549 SLC8A1-206ENST00000406391 2814 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SPTA1P02549 NTRK3-201ENST00000317501 3826 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SPTA1P02549 OR2A20P-201ENST00000479887 2913 ntBASIC5.93□□□□□ -1.46
SPTA1P02549 AC007938.1-201ENST00000562524 2902 ntBASIC5.93□□□□□ -1.46
SPTA1P02549 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SPTA1P02549 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
SPTA1P02549 PAICS-202ENST00000399688 3297 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SPTA1P02549 MIR23A-201ENST00000385245 73 ntBASIC5.93□□□□□ -1.46
SPTA1P02549 RPL37P18-201ENST00000411602 243 ntBASIC5.93□□□□□ -1.46
SPTA1P02549 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC5.93□□□□□ -1.46
SPTA1P02549 AC245884.2-201ENST00000426257 404 ntBASIC5.93□□□□□ -1.46
SPTA1P02549 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SPTA1P02549 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
SPTA1P02549 RPS12P17-201ENST00000438591 377 ntBASIC5.93□□□□□ -1.46
SPTA1P02549 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.93□□□□□ -1.46
SPTA1P02549 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.93□□□□□ -1.46
SPTA1P02549 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.93□□□□□ -1.46
SPTA1P02549 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
SPTA1P02549 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.93□□□□□ -1.46
SPTA1P02549 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.93□□□□□ -1.46
SPTA1P02549 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SPTA1P02549 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SPTA1P02549 AC073342.3-201ENST00000624211 193 ntBASIC5.93□□□□□ -1.46
SPTA1P02549 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SPTA1P02549 ESRG-201ENST00000583516 3140 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SPTA1P02549 RACGAP1P-201ENST00000550663 1879 ntBASIC5.92□□□□□ -1.46
SPTA1P02549 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SPTA1P02549 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SPTA1P02549 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
SPTA1P02549 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SPTA1P02549 SLC36A2-201ENST00000335244 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SPTA1P02549 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.92□□□□□ -1.46
SPTA1P02549 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms