Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 RPL5P14-201ENST00000494197 878 ntBASIC7.79□□□□□ -1.16
UPF2Q9HAU5 RPL19P11-201ENST00000495944 589 ntBASIC7.79□□□□□ -1.16
UPF2Q9HAU5 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC7.79□□□□□ -1.16
UPF2Q9HAU5 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC7.79□□□□□ -1.16
UPF2Q9HAU5 SCARNA5-201ENST00000516201 276 ntBASIC7.79□□□□□ -1.16
UPF2Q9HAU5 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC7.79□□□□□ -1.16
UPF2Q9HAU5 CCL2-202ENST00000580907 736 ntTSL 2 BASIC7.79□□□□□ -1.16
UPF2Q9HAU5 AF186192.2-204ENST00000581667 524 ntBASIC7.79□□□□□ -1.16
UPF2Q9HAU5 AL138960.1-201ENST00000613838 513 ntBASIC7.79□□□□□ -1.16
UPF2Q9HAU5 MIR6807-201ENST00000621968 92 ntBASIC7.79□□□□□ -1.16
UPF2Q9HAU5 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
UPF2Q9HAU5 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
UPF2Q9HAU5 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
UPF2Q9HAU5 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
UPF2Q9HAU5 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
UPF2Q9HAU5 EEF1A1P16-201ENST00000325349 1414 ntBASIC7.78□□□□□ -1.16
UPF2Q9HAU5 EEF1A1P28-201ENST00000450915 1403 ntBASIC7.78□□□□□ -1.16
UPF2Q9HAU5 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
UPF2Q9HAU5 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
UPF2Q9HAU5 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
UPF2Q9HAU5 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
UPF2Q9HAU5 ZNF101P1-201ENST00000435701 1720 ntBASIC7.78□□□□□ -1.16
UPF2Q9HAU5 FHL5-203ENST00000541107 1904 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
UPF2Q9HAU5 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
UPF2Q9HAU5 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
UPF2Q9HAU5 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC7.78□□□□□ -1.16
UPF2Q9HAU5 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
UPF2Q9HAU5 RNA5-8SP5-201ENST00000365304 152 ntBASIC7.78□□□□□ -1.16
UPF2Q9HAU5 HHLA3-203ENST00000370940 775 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
UPF2Q9HAU5 AC245036.1-201ENST00000391727 309 ntBASIC7.78□□□□□ -1.16
UPF2Q9HAU5 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC7.78□□□□□ -1.16
UPF2Q9HAU5 AL662791.3-201ENST00000413771 776 ntBASIC7.78□□□□□ -1.16
UPF2Q9HAU5 AL359633.1-201ENST00000421403 310 ntBASIC7.78□□□□□ -1.16
UPF2Q9HAU5 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC7.78□□□□□ -1.16
UPF2Q9HAU5 AC016027.5-201ENST00000427227 210 ntBASIC7.78□□□□□ -1.16
UPF2Q9HAU5 ETF1P1-206ENST00000427296 984 ntBASIC7.78□□□□□ -1.16
UPF2Q9HAU5 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
UPF2Q9HAU5 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC7.78□□□□□ -1.16
UPF2Q9HAU5 BX679664.2-201ENST00000439282 283 ntBASIC7.78□□□□□ -1.16
UPF2Q9HAU5 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC7.78□□□□□ -1.16
UPF2Q9HAU5 GAPDHP33-201ENST00000443168 1013 ntBASIC7.78□□□□□ -1.16
UPF2Q9HAU5 AL139135.2-201ENST00000445040 433 ntBASIC7.78□□□□□ -1.16
UPF2Q9HAU5 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
UPF2Q9HAU5 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC7.78□□□□□ -1.16
UPF2Q9HAU5 RPS16P9-201ENST00000477220 427 ntBASIC7.78□□□□□ -1.16
UPF2Q9HAU5 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC7.78□□□□□ -1.16
UPF2Q9HAU5 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC7.78□□□□□ -1.16
UPF2Q9HAU5 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC7.78□□□□□ -1.16
UPF2Q9HAU5 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC7.78□□□□□ -1.16
UPF2Q9HAU5 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC7.78□□□□□ -1.16
UPF2Q9HAU5 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC7.78□□□□□ -1.16
UPF2Q9HAU5 MIR4800-201ENST00000537353 80 ntBASIC7.78□□□□□ -1.16
UPF2Q9HAU5 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC7.78□□□□□ -1.16
UPF2Q9HAU5 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC7.78□□□□□ -1.16
UPF2Q9HAU5 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC7.78□□□□□ -1.16
UPF2Q9HAU5 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC7.78□□□□□ -1.16
UPF2Q9HAU5 AL352984.2-201ENST00000611153 546 ntBASIC7.78□□□□□ -1.16
UPF2Q9HAU5 IGKV2OR2-10-201ENST00000613976 311 ntBASIC7.78□□□□□ -1.16
UPF2Q9HAU5 AC005858.3-201ENST00000624756 589 ntBASIC7.78□□□□□ -1.16
UPF2Q9HAU5 AC073488.9-201ENST00000631601 754 ntBASIC7.78□□□□□ -1.16
UPF2Q9HAU5 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC7.78□□□□□ -1.16
UPF2Q9HAU5 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC7.78□□□□□ -1.16
UPF2Q9HAU5 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
UPF2Q9HAU5 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
UPF2Q9HAU5 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC7.78□□□□□ -1.16
UPF2Q9HAU5 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
UPF2Q9HAU5 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
UPF2Q9HAU5 CCNT2P1-201ENST00000423082 1315 ntBASIC7.78□□□□□ -1.16
UPF2Q9HAU5 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC7.77□□□□□ -1.16
UPF2Q9HAU5 AL359976.1-201ENST00000418655 3528 ntBASIC7.77□□□□□ -1.17
UPF2Q9HAU5 AC092646.2-201ENST00000431242 2095 ntBASIC7.77□□□□□ -1.17
UPF2Q9HAU5 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC7.77□□□□□ -1.17
UPF2Q9HAU5 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
UPF2Q9HAU5 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
UPF2Q9HAU5 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC7.77□□□□□ -1.17
UPF2Q9HAU5 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
UPF2Q9HAU5 Y_RNA.209-201ENST00000364156 111 ntBASIC7.77□□□□□ -1.17
UPF2Q9HAU5 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
UPF2Q9HAU5 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC7.77□□□□□ -1.17
UPF2Q9HAU5 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
UPF2Q9HAU5 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
UPF2Q9HAU5 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC7.77□□□□□ -1.17
UPF2Q9HAU5 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC7.77□□□□□ -1.17
UPF2Q9HAU5 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
UPF2Q9HAU5 AC025271.1-201ENST00000485045 429 ntBASIC7.77□□□□□ -1.17
UPF2Q9HAU5 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
UPF2Q9HAU5 COX6B1P4-201ENST00000519826 484 ntBASIC7.77□□□□□ -1.17
UPF2Q9HAU5 RRM1-AS1-201ENST00000529323 346 ntTSL 5 BASIC7.77□□□□□ -1.17
UPF2Q9HAU5 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC7.77□□□□□ -1.17
UPF2Q9HAU5 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
UPF2Q9HAU5 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC7.77□□□□□ -1.17
UPF2Q9HAU5 ONECUT1-202ENST00000560699 996 ntTSL 3 BASIC7.77□□□□□ -1.17
UPF2Q9HAU5 AC090616.1-201ENST00000583895 447 ntBASIC7.77□□□□□ -1.17
UPF2Q9HAU5 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
UPF2Q9HAU5 EXOSC3P2-201ENST00000594464 497 ntBASIC7.77□□□□□ -1.17
UPF2Q9HAU5 HNRNPA3P9-201ENST00000604913 979 ntBASIC7.77□□□□□ -1.17
UPF2Q9HAU5 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC7.77□□□□□ -1.17
UPF2Q9HAU5 AL352984.2-202ENST00000613699 155 ntBASIC7.77□□□□□ -1.17
UPF2Q9HAU5 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
UPF2Q9HAU5 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC7.77□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms