Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 AL645568.1-202ENST00000437190 1016 ntTSL 5 BASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 HMGB2-202ENST00000438704 1032 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 AL360221.1-201ENST00000445989 335 ntBASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 AC092570.2-201ENST00000452117 1143 ntBASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 RPS27AP8-201ENST00000452665 445 ntBASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 AL359385.1-201ENST00000456509 365 ntBASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 AL135933.1-201ENST00000498657 802 ntBASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 RPL41-202ENST00000501597 469 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 OR5H3P-201ENST00000502817 919 ntBASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 RNU6-1178P-201ENST00000516674 107 ntBASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 RPL12P22-201ENST00000519073 490 ntBASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 AC060788.1-201ENST00000521318 469 ntBASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 AP001994.1-201ENST00000527539 826 ntBASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 RERGL-202ENST00000536890 367 ntTSL 3 BASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 AC087257.2-201ENST00000538759 928 ntBASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 CYB5AP5-201ENST00000549779 389 ntBASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 AC009117.3-201ENST00000568136 543 ntTSL 4 BASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 AC124283.4-201ENST00000581815 456 ntBASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 EIF1-207ENST00000591776 797 ntTSL 4 BASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 MIMT1-201ENST00000597105 1050 ntBASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 AL139286.2-201ENST00000606838 396 ntBASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 ZNF595-204ENST00000609518 2115 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 AL354976.1-201ENST00000613843 387 ntBASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 AC018755.4-201ENST00000619715 454 ntBASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 Z69908.1-201ENST00000622603 247 ntBASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 LINC02324-201ENST00000531609 1442 ntTSL 2 BASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 GPR19-201ENST00000332427 1743 ntAPPRIS P1 TSL 4 BASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 RHOJ-201ENST00000316754 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 DCLRE1C-211ENST00000396817 2761 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 MORC1-202ENST00000483760 3056 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 ANGPT2-203ENST00000523120 2997 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 KARSP3-201ENST00000571212 1504 ntBASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 AL096816.1-201ENST00000623300 2920 ntBASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 SERPINB13-202ENST00000344731 3114 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 HSPD1P4-201ENST00000547203 1702 ntBASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 ACTG2-203ENST00000409731 1413 ntTSL 2 BASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 RBMX2P2-201ENST00000257020 946 ntBASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 AL078621.1-201ENST00000272567 768 ntBASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 Y_RNA.559-201ENST00000384686 107 ntBASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 AL355375.1-201ENST00000405686 392 ntBASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 RNU4-22P-201ENST00000411058 166 ntBASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 MTND1P23-201ENST00000416931 372 ntBASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 FTOP1-201ENST00000419363 861 ntBASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 EEF1GP7-201ENST00000422983 703 ntBASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 GPN3P1-201ENST00000423883 535 ntBASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 VDAC2P3-201ENST00000430995 828 ntBASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 AC245047.1-201ENST00000433276 873 ntBASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 AC244505.2-201ENST00000435089 759 ntBASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 LIN28AP2-201ENST00000445283 458 ntBASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 CREM-220ENST00000463314 964 ntTSL 2 BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms