Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC7.72□□□□□ -1.17
CCDC96Q2M329 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC7.72□□□□□ -1.17
CCDC96Q2M329 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC7.72□□□□□ -1.17
CCDC96Q2M329 AC026956.1-201ENST00000558741 396 ntBASIC7.72□□□□□ -1.17
CCDC96Q2M329 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC7.72□□□□□ -1.17
CCDC96Q2M329 AC092718.4-201ENST00000566639 716 ntBASIC7.72□□□□□ -1.17
CCDC96Q2M329 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC7.72□□□□□ -1.17
CCDC96Q2M329 AL049840.5-201ENST00000602827 552 ntBASIC7.72□□□□□ -1.17
CCDC96Q2M329 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC7.72□□□□□ -1.17
CCDC96Q2M329 AC073488.9-201ENST00000631601 754 ntBASIC7.72□□□□□ -1.17
CCDC96Q2M329 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
CCDC96Q2M329 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC7.72□□□□□ -1.17
CCDC96Q2M329 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC7.72□□□□□ -1.17
CCDC96Q2M329 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
CCDC96Q2M329 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC7.72□□□□□ -1.17
CCDC96Q2M329 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CCDC96Q2M329 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CCDC96Q2M329 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC7.72□□□□□ -1.17
CCDC96Q2M329 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC7.72□□□□□ -1.17
CCDC96Q2M329 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC7.72□□□□□ -1.17
CCDC96Q2M329 SNX18P3-202ENST00000565670 1750 ntBASIC7.71□□□□□ -1.17
CCDC96Q2M329 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
CCDC96Q2M329 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
CCDC96Q2M329 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.71□□□□□ -1.17
CCDC96Q2M329 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
CCDC96Q2M329 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
CCDC96Q2M329 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.18
CCDC96Q2M329 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC7.71□□□□□ -1.18
CCDC96Q2M329 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC7.71□□□□□ -1.18
CCDC96Q2M329 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
CCDC96Q2M329 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC7.71□□□□□ -1.18
CCDC96Q2M329 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CCDC96Q2M329 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC7.71□□□□□ -1.18
CCDC96Q2M329 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CCDC96Q2M329 RN7SKP250-201ENST00000363924 321 ntBASIC7.71□□□□□ -1.18
CCDC96Q2M329 AL139184.1-202ENST00000422303 222 ntBASIC7.71□□□□□ -1.18
CCDC96Q2M329 GPN3P1-201ENST00000423883 535 ntBASIC7.71□□□□□ -1.18
CCDC96Q2M329 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
CCDC96Q2M329 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC7.71□□□□□ -1.18
CCDC96Q2M329 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC7.71□□□□□ -1.18
CCDC96Q2M329 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC7.71□□□□□ -1.18
CCDC96Q2M329 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC7.71□□□□□ -1.18
CCDC96Q2M329 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC7.71□□□□□ -1.18
CCDC96Q2M329 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC7.71□□□□□ -1.18
CCDC96Q2M329 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC7.71□□□□□ -1.18
CCDC96Q2M329 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC7.71□□□□□ -1.18
CCDC96Q2M329 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC7.71□□□□□ -1.18
CCDC96Q2M329 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC7.71□□□□□ -1.18
CCDC96Q2M329 AC020765.1-201ENST00000604296 328 ntBASIC7.71□□□□□ -1.18
CCDC96Q2M329 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CCDC96Q2M329 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CCDC96Q2M329 AC114477.1-201ENST00000605097 605 ntBASIC7.71□□□□□ -1.18
CCDC96Q2M329 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC7.71□□□□□ -1.18
CCDC96Q2M329 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CCDC96Q2M329 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC7.71□□□□□ -1.18
CCDC96Q2M329 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC7.71□□□□□ -1.18
CCDC96Q2M329 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CCDC96Q2M329 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CCDC96Q2M329 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC7.7□□□□□ -1.18
CCDC96Q2M329 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC7.7□□□□□ -1.18
CCDC96Q2M329 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC7.7□□□□□ -1.18
CCDC96Q2M329 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CCDC96Q2M329 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
CCDC96Q2M329 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CCDC96Q2M329 SMG1P5-202ENST00000529428 4219 ntBASIC7.7□□□□□ -1.18
CCDC96Q2M329 SMG1P2-201ENST00000566127 4221 ntBASIC7.7□□□□□ -1.18
CCDC96Q2M329 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CCDC96Q2M329 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
CCDC96Q2M329 AL049697.3-201ENST00000406493 982 ntBASIC7.7□□□□□ -1.18
CCDC96Q2M329 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC7.7□□□□□ -1.18
CCDC96Q2M329 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC7.7□□□□□ -1.18
CCDC96Q2M329 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC7.7□□□□□ -1.18
CCDC96Q2M329 RANP7-201ENST00000418085 644 ntBASIC7.7□□□□□ -1.18
CCDC96Q2M329 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC7.7□□□□□ -1.18
CCDC96Q2M329 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC7.7□□□□□ -1.18
CCDC96Q2M329 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC7.7□□□□□ -1.18
CCDC96Q2M329 GUSBP9-201ENST00000510138 584 ntBASIC7.7□□□□□ -1.18
CCDC96Q2M329 AC008429.2-201ENST00000523057 864 ntBASIC7.7□□□□□ -1.18
CCDC96Q2M329 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC7.7□□□□□ -1.18
CCDC96Q2M329 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC7.7□□□□□ -1.18
CCDC96Q2M329 AP003115.1-201ENST00000569849 463 ntBASIC7.7□□□□□ -1.18
CCDC96Q2M329 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC7.7□□□□□ -1.18
CCDC96Q2M329 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC7.7□□□□□ -1.18
CCDC96Q2M329 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC7.7□□□□□ -1.18
CCDC96Q2M329 WBP1LP12-201ENST00000604449 331 ntBASIC7.7□□□□□ -1.18
CCDC96Q2M329 AC018692.2-201ENST00000624130 348 ntBASIC7.7□□□□□ -1.18
CCDC96Q2M329 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC7.7□□□□□ -1.18
CCDC96Q2M329 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC7.7□□□□□ -1.18
CCDC96Q2M329 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC7.7□□□□□ -1.18
CCDC96Q2M329 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CCDC96Q2M329 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC7.7□□□□□ -1.18
CCDC96Q2M329 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
CCDC96Q2M329 AC110597.1-201ENST00000562669 3176 ntBASIC7.7□□□□□ -1.18
CCDC96Q2M329 AC119674.1-204ENST00000641348 1343 ntBASIC7.7□□□□□ -1.18
CCDC96Q2M329 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CCDC96Q2M329 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CCDC96Q2M329 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC7.7□□□□□ -1.18
CCDC96Q2M329 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CCDC96Q2M329 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CCDC96Q2M329 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms