Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 MIR3157-201ENST00000578688 85 ntBASIC5.83□□□□□ -1.48
H3F3AP84243 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC5.83□□□□□ -1.48
H3F3AP84243 AC024267.2-201ENST00000582737 417 ntBASIC5.83□□□□□ -1.48
H3F3AP84243 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC5.83□□□□□ -1.48
H3F3AP84243 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
H3F3AP84243 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
H3F3AP84243 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
H3F3AP84243 AC068213.1-201ENST00000625124 226 ntBASIC5.83□□□□□ -1.48
H3F3AP84243 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC5.83□□□□□ -1.48
H3F3AP84243 AL121936.2-201ENST00000641935 662 ntBASIC5.83□□□□□ -1.48
H3F3AP84243 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC5.83□□□□□ -1.48
H3F3AP84243 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
H3F3AP84243 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
H3F3AP84243 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC5.83□□□□□ -1.48
H3F3AP84243 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
H3F3AP84243 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
H3F3AP84243 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
H3F3AP84243 AC005702.3-201ENST00000585345 1447 ntBASIC5.82□□□□□ -1.48
H3F3AP84243 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
H3F3AP84243 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.82□□□□□ -1.48
H3F3AP84243 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
H3F3AP84243 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC5.82□□□□□ -1.48
H3F3AP84243 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
H3F3AP84243 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
H3F3AP84243 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC5.82□□□□□ -1.48
H3F3AP84243 AL050335.1-201ENST00000396909 869 ntBASIC5.82□□□□□ -1.48
H3F3AP84243 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC5.82□□□□□ -1.48
H3F3AP84243 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.82□□□□□ -1.48
H3F3AP84243 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC5.82□□□□□ -1.48
H3F3AP84243 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC5.82□□□□□ -1.48
H3F3AP84243 AC083862.1-201ENST00000427378 1242 ntBASIC5.82□□□□□ -1.48
H3F3AP84243 GAPDHP19-201ENST00000431768 1005 ntBASIC5.82□□□□□ -1.48
H3F3AP84243 AC003989.1-201ENST00000434569 565 ntBASIC5.82□□□□□ -1.48
H3F3AP84243 NPM1P23-201ENST00000440193 849 ntBASIC5.82□□□□□ -1.48
H3F3AP84243 UBQLN1P1-207ENST00000441056 1169 ntBASIC5.82□□□□□ -1.48
H3F3AP84243 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.82□□□□□ -1.48
H3F3AP84243 CT45A11P-201ENST00000448043 1134 ntBASIC5.82□□□□□ -1.48
H3F3AP84243 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC5.82□□□□□ -1.48
H3F3AP84243 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
H3F3AP84243 MRPL57P6-201ENST00000506570 309 ntBASIC5.82□□□□□ -1.48
H3F3AP84243 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC5.82□□□□□ -1.48
H3F3AP84243 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.82□□□□□ -1.48
H3F3AP84243 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.82□□□□□ -1.48
H3F3AP84243 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC5.82□□□□□ -1.48
H3F3AP84243 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC5.82□□□□□ -1.48
H3F3AP84243 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.82□□□□□ -1.48
H3F3AP84243 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC5.82□□□□□ -1.48
H3F3AP84243 AL008582.1-201ENST00000609612 442 ntBASIC5.82□□□□□ -1.48
H3F3AP84243 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
H3F3AP84243 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
H3F3AP84243 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
H3F3AP84243 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
H3F3AP84243 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.82□□□□□ -1.48
H3F3AP84243 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
H3F3AP84243 AC217777.1-201ENST00000570034 1471 ntBASIC5.82□□□□□ -1.48
H3F3AP84243 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC5.82□□□□□ -1.48
H3F3AP84243 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
H3F3AP84243 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
H3F3AP84243 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC5.82□□□□□ -1.48
H3F3AP84243 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC5.81□□□□□ -1.48
H3F3AP84243 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
H3F3AP84243 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
H3F3AP84243 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.81□□□□□ -1.48
H3F3AP84243 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.81□□□□□ -1.48
H3F3AP84243 AC011455.2-201ENST00000599320 3336 ntBASIC5.81□□□□□ -1.48
H3F3AP84243 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
H3F3AP84243 RPL31P11-201ENST00000426558 1558 ntBASIC5.81□□□□□ -1.48
H3F3AP84243 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
H3F3AP84243 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
H3F3AP84243 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
H3F3AP84243 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
H3F3AP84243 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
H3F3AP84243 RNA5SP350-201ENST00000363298 111 ntBASIC5.81□□□□□ -1.48
H3F3AP84243 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
H3F3AP84243 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
H3F3AP84243 AL391419.1-201ENST00000398901 1275 ntBASIC5.81□□□□□ -1.48
H3F3AP84243 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC5.81□□□□□ -1.48
H3F3AP84243 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC5.81□□□□□ -1.48
H3F3AP84243 AL139184.1-202ENST00000422303 222 ntBASIC5.81□□□□□ -1.48
H3F3AP84243 AL645939.3-201ENST00000435408 225 ntBASIC5.81□□□□□ -1.48
H3F3AP84243 PA2G4P1-201ENST00000442248 1197 ntBASIC5.81□□□□□ -1.48
H3F3AP84243 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC5.81□□□□□ -1.48
H3F3AP84243 AL031681.1-201ENST00000443304 400 ntBASIC5.81□□□□□ -1.48
H3F3AP84243 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
H3F3AP84243 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC5.81□□□□□ -1.48
H3F3AP84243 MGAT2P1-201ENST00000449718 797 ntBASIC5.81□□□□□ -1.48
H3F3AP84243 AC073476.1-201ENST00000452854 407 ntBASIC5.81□□□□□ -1.48
H3F3AP84243 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.81□□□□□ -1.48
H3F3AP84243 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC5.81□□□□□ -1.48
H3F3AP84243 RN7SL413P-201ENST00000482700 297 ntBASIC5.81□□□□□ -1.48
H3F3AP84243 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
H3F3AP84243 AC018645.1-201ENST00000505003 109 ntBASIC5.81□□□□□ -1.48
H3F3AP84243 NACAP5-201ENST00000509863 636 ntBASIC5.81□□□□□ -1.48
H3F3AP84243 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC5.81□□□□□ -1.48
H3F3AP84243 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC5.81□□□□□ -1.48
H3F3AP84243 RAB30-209ENST00000532548 644 ntTSL 3 BASIC5.81□□□□□ -1.48
H3F3AP84243 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
H3F3AP84243 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.81□□□□□ -1.48
H3F3AP84243 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
H3F3AP84243 RPL41P2-201ENST00000544920 409 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 252.7 ms