Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC6.71□□□□□ -1.34
CDH6P55285 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.71□□□□□ -1.34
CDH6P55285 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.71□□□□□ -1.34
CDH6P55285 AC027796.1-201ENST00000575593 512 ntBASIC6.71□□□□□ -1.34
CDH6P55285 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.71□□□□□ -1.34
CDH6P55285 MIR6085-201ENST00000618314 110 ntBASIC6.71□□□□□ -1.34
CDH6P55285 AC135068.11-201ENST00000636378 921 ntBASIC6.71□□□□□ -1.34
CDH6P55285 AC119674.1-217ENST00000641942 1086 ntBASIC6.71□□□□□ -1.34
CDH6P55285 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CDH6P55285 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CDH6P55285 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.71□□□□□ -1.34
CDH6P55285 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CDH6P55285 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CDH6P55285 AL022323.4-201ENST00000623980 13120 ntBASIC6.71□□□□□ -1.34
CDH6P55285 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.71□□□□□ -1.34
CDH6P55285 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CDH6P55285 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CDH6P55285 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CDH6P55285 AC011455.2-201ENST00000599320 3336 ntBASIC6.7□□□□□ -1.34
CDH6P55285 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.7□□□□□ -1.34
CDH6P55285 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.7□□□□□ -1.34
CDH6P55285 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CDH6P55285 AC010329.1-201ENST00000593903 8328 ntBASIC6.7□□□□□ -1.34
CDH6P55285 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CDH6P55285 ARSFP1-201ENST00000398758 477 ntBASIC6.7□□□□□ -1.34
CDH6P55285 AL391419.1-201ENST00000398901 1275 ntBASIC6.7□□□□□ -1.34
CDH6P55285 RNA5SP155-201ENST00000411154 129 ntBASIC6.7□□□□□ -1.34
CDH6P55285 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC6.7□□□□□ -1.34
CDH6P55285 PSMD8P1-201ENST00000436275 769 ntBASIC6.7□□□□□ -1.34
CDH6P55285 AL355355.1-201ENST00000442900 793 ntBASIC6.7□□□□□ -1.34
CDH6P55285 WDR82P2-201ENST00000444540 928 ntBASIC6.7□□□□□ -1.34
CDH6P55285 AL020997.1-201ENST00000446554 349 ntBASIC6.7□□□□□ -1.34
CDH6P55285 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.7□□□□□ -1.34
CDH6P55285 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC6.7□□□□□ -1.34
CDH6P55285 AP003385.3-201ENST00000472498 287 ntBASIC6.7□□□□□ -1.34
CDH6P55285 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.7□□□□□ -1.34
CDH6P55285 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC6.7□□□□□ -1.34
CDH6P55285 AC114324.2-202ENST00000503812 134 ntBASIC6.7□□□□□ -1.34
CDH6P55285 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC6.7□□□□□ -1.34
CDH6P55285 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CDH6P55285 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.7□□□□□ -1.34
CDH6P55285 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.7□□□□□ -1.34
CDH6P55285 AL121579.2-201ENST00000555466 590 ntBASIC6.7□□□□□ -1.34
CDH6P55285 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.7□□□□□ -1.34
CDH6P55285 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC6.7□□□□□ -1.34
CDH6P55285 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.7□□□□□ -1.34
CDH6P55285 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.7□□□□□ -1.34
CDH6P55285 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC6.7□□□□□ -1.34
CDH6P55285 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.7□□□□□ -1.34
CDH6P55285 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.7□□□□□ -1.34
CDH6P55285 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.7□□□□□ -1.34
CDH6P55285 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.7□□□□□ -1.34
CDH6P55285 AP001885.1-201ENST00000621658 558 ntBASIC6.7□□□□□ -1.34
CDH6P55285 AL596275.2-208ENST00000641192 594 ntBASIC6.7□□□□□ -1.34
CDH6P55285 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.7□□□□□ -1.34
CDH6P55285 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CDH6P55285 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CDH6P55285 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CDH6P55285 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CDH6P55285 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
CDH6P55285 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
CDH6P55285 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
CDH6P55285 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CDH6P55285 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
CDH6P55285 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC6.69□□□□□ -1.34
CDH6P55285 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.69□□□□□ -1.34
CDH6P55285 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CDH6P55285 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CDH6P55285 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CDH6P55285 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.69□□□□□ -1.34
CDH6P55285 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CDH6P55285 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
CDH6P55285 SNORD94-201ENST00000386037 137 ntBASIC6.69□□□□□ -1.34
CDH6P55285 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CDH6P55285 U3.43-201ENST00000410734 213 ntBASIC6.69□□□□□ -1.34
CDH6P55285 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC6.69□□□□□ -1.34
CDH6P55285 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.69□□□□□ -1.34
CDH6P55285 COL11A2P1-205ENST00000441798 676 ntBASIC6.69□□□□□ -1.34
CDH6P55285 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.69□□□□□ -1.34
CDH6P55285 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.69□□□□□ -1.34
CDH6P55285 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.69□□□□□ -1.34
CDH6P55285 AP005639.1-201ENST00000526939 192 ntBASIC6.69□□□□□ -1.34
CDH6P55285 OR9G2P-201ENST00000533326 880 ntBASIC6.69□□□□□ -1.34
CDH6P55285 ASB8-207ENST00000536953 923 ntTSL 2 BASIC6.69□□□□□ -1.34
CDH6P55285 AC233702.7-202ENST00000582941 211 ntBASIC6.69□□□□□ -1.34
CDH6P55285 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC6.69□□□□□ -1.34
CDH6P55285 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC6.69□□□□□ -1.34
CDH6P55285 AC004805.3-201ENST00000603178 310 ntBASIC6.69□□□□□ -1.34
CDH6P55285 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
CDH6P55285 CLUHP10-201ENST00000631979 980 ntBASIC6.69□□□□□ -1.34
CDH6P55285 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.69□□□□□ -1.34
CDH6P55285 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.69□□□□□ -1.34
CDH6P55285 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.69□□□□□ -1.34
CDH6P55285 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CDH6P55285 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CDH6P55285 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
CDH6P55285 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
CDH6P55285 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CDH6P55285 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.69□□□□□ -1.34
CDH6P55285 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms