Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SOX2P48431 DLEU2L-201ENST00000371086 3555 ntBASIC5.9□□□□□ -1.46
SOX2P48431 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SOX2P48431 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.9□□□□□ -1.46
SOX2P48431 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
SOX2P48431 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
SOX2P48431 Z93022.1-201ENST00000433228 1554 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SOX2P48431 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC5.9□□□□□ -1.46
SOX2P48431 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SOX2P48431 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC5.9□□□□□ -1.46
SOX2P48431 ARL4A-201ENST00000356797 1147 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
SOX2P48431 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
SOX2P48431 AL353625.1-202ENST00000366273 571 ntBASIC5.9□□□□□ -1.46
SOX2P48431 TRMT13-203ENST00000370143 476 ntTSL 3 BASIC5.9□□□□□ -1.46
SOX2P48431 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC5.9□□□□□ -1.46
SOX2P48431 CYCSP17-201ENST00000407870 315 ntBASIC5.9□□□□□ -1.46
SOX2P48431 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SOX2P48431 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC5.9□□□□□ -1.46
SOX2P48431 AL121917.1-202ENST00000424434 367 ntTSL 3 BASIC5.9□□□□□ -1.46
SOX2P48431 AL390866.1-201ENST00000425137 469 ntTSL 5 BASIC5.9□□□□□ -1.46
SOX2P48431 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC5.9□□□□□ -1.46
SOX2P48431 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC5.9□□□□□ -1.46
SOX2P48431 TXNP2-201ENST00000443918 295 ntBASIC5.9□□□□□ -1.46
SOX2P48431 AC090954.1-201ENST00000445502 361 ntBASIC5.9□□□□□ -1.46
SOX2P48431 RPL7AP56-201ENST00000476420 791 ntBASIC5.9□□□□□ -1.46
SOX2P48431 CC2D2A-207ENST00000507954 548 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
SOX2P48431 ROPN1B-207ENST00000511082 782 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SOX2P48431 AC009879.1-201ENST00000520029 839 ntBASIC5.9□□□□□ -1.46
SOX2P48431 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
SOX2P48431 IGLV3-6-201ENST00000523937 250 ntBASIC5.9□□□□□ -1.46
SOX2P48431 OR7E161P-201ENST00000533722 967 ntBASIC5.9□□□□□ -1.46
SOX2P48431 AC068339.2-201ENST00000534395 618 ntBASIC5.9□□□□□ -1.46
SOX2P48431 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SOX2P48431 CD69-203ENST00000536709 1020 ntTSL 2 BASIC5.9□□□□□ -1.46
SOX2P48431 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC5.9□□□□□ -1.46
SOX2P48431 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
SOX2P48431 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC5.9□□□□□ -1.46
SOX2P48431 MTND2P17-201ENST00000550281 688 ntBASIC5.9□□□□□ -1.46
SOX2P48431 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC5.9□□□□□ -1.46
SOX2P48431 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC5.9□□□□□ -1.46
SOX2P48431 AC013489.1-201ENST00000561140 598 ntTSL 3 BASIC5.9□□□□□ -1.46
SOX2P48431 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
SOX2P48431 EIF4A3P1-201ENST00000578499 647 ntBASIC5.9□□□□□ -1.46
SOX2P48431 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SOX2P48431 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC5.9□□□□□ -1.46
SOX2P48431 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC5.9□□□□□ -1.46
SOX2P48431 AL450270.1-201ENST00000606160 391 ntBASIC5.9□□□□□ -1.46
SOX2P48431 AL355802.4-201ENST00000607635 548 ntBASIC5.9□□□□□ -1.46
SOX2P48431 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC5.9□□□□□ -1.46
SOX2P48431 5S_rRNA.23-201ENST00000612086 102 ntBASIC5.9□□□□□ -1.46
SOX2P48431 AC091046.2-201ENST00000620775 665 ntBASIC5.9□□□□□ -1.46
SOX2P48431 AC012653.2-201ENST00000621880 420 ntBASIC5.9□□□□□ -1.46
SOX2P48431 AC087893.2-201ENST00000623272 255 ntBASIC5.9□□□□□ -1.46
SOX2P48431 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC5.9□□□□□ -1.46
SOX2P48431 OR10G8-202ENST00000641224 1033 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
SOX2P48431 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.9□□□□□ -1.47
SOX2P48431 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.47
SOX2P48431 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.9□□□□□ -1.47
SOX2P48431 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SOX2P48431 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC5.9□□□□□ -1.47
SOX2P48431 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC5.9□□□□□ -1.47
SOX2P48431 ZNF658B-201ENST00000602828 3408 ntBASIC5.9□□□□□ -1.47
SOX2P48431 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC5.9□□□□□ -1.47
SOX2P48431 NDFIP2-206ENST00000620924 2324 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
SOX2P48431 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
SOX2P48431 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SOX2P48431 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
SOX2P48431 Z97989.1-201ENST00000531702 2421 ntBASIC5.89□□□□□ -1.47
SOX2P48431 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
SOX2P48431 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SOX2P48431 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SOX2P48431 AC110792.3-201ENST00000595906 1614 ntBASIC5.89□□□□□ -1.47
SOX2P48431 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC5.89□□□□□ -1.47
SOX2P48431 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SOX2P48431 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
SOX2P48431 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC5.89□□□□□ -1.47
SOX2P48431 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SOX2P48431 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SOX2P48431 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
SOX2P48431 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SOX2P48431 AL035405.1-201ENST00000400795 710 ntBASIC5.89□□□□□ -1.47
SOX2P48431 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SOX2P48431 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.89□□□□□ -1.47
SOX2P48431 AC017035.1-201ENST00000411999 1115 ntBASIC5.89□□□□□ -1.47
SOX2P48431 ARAFP1-201ENST00000422172 605 ntBASIC5.89□□□□□ -1.47
SOX2P48431 ZBTB8OSP2-201ENST00000423890 504 ntBASIC5.89□□□□□ -1.47
SOX2P48431 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SOX2P48431 AL139415.1-201ENST00000424862 352 ntBASIC5.89□□□□□ -1.47
SOX2P48431 AL645936.2-201ENST00000430565 928 ntBASIC5.89□□□□□ -1.47
SOX2P48431 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC5.89□□□□□ -1.47
SOX2P48431 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
SOX2P48431 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SOX2P48431 DPP10-AS1-202ENST00000448663 644 ntTSL 3 BASIC5.89□□□□□ -1.47
SOX2P48431 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC5.89□□□□□ -1.47
SOX2P48431 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC5.89□□□□□ -1.47
SOX2P48431 AC004692.1-201ENST00000455430 424 ntBASIC5.89□□□□□ -1.47
SOX2P48431 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC5.89□□□□□ -1.47
SOX2P48431 RN7SL223P-201ENST00000470401 294 ntBASIC5.89□□□□□ -1.47
SOX2P48431 RPL23AP80-201ENST00000495605 424 ntBASIC5.89□□□□□ -1.47
SOX2P48431 SSR3-208ENST00000496050 579 ntTSL 4 BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms