Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC6.81□□□□□ -1.32
MMP13P45452 BMS1P16-201ENST00000556075 1147 ntBASIC6.81□□□□□ -1.32
MMP13P45452 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC6.81□□□□□ -1.32
MMP13P45452 ANP32BP1-202ENST00000568553 737 ntBASIC6.81□□□□□ -1.32
MMP13P45452 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC6.81□□□□□ -1.32
MMP13P45452 AP005901.4-201ENST00000577336 569 ntBASIC6.81□□□□□ -1.32
MMP13P45452 AC068408.1-201ENST00000577406 1144 ntBASIC6.81□□□□□ -1.32
MMP13P45452 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.81□□□□□ -1.32
MMP13P45452 AL162574.2-201ENST00000614618 657 ntBASIC6.81□□□□□ -1.32
MMP13P45452 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
MMP13P45452 AC009452.1-201ENST00000640823 606 ntBASIC6.81□□□□□ -1.32
MMP13P45452 MTCO1P25-201ENST00000414449 1799 ntBASIC6.81□□□□□ -1.32
MMP13P45452 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
MMP13P45452 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
MMP13P45452 AC004023.1-201ENST00000561473 1744 ntBASIC6.81□□□□□ -1.32
MMP13P45452 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
MMP13P45452 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
MMP13P45452 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
MMP13P45452 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
MMP13P45452 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
MMP13P45452 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.8□□□□□ -1.32
MMP13P45452 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
MMP13P45452 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
MMP13P45452 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.8□□□□□ -1.32
MMP13P45452 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
MMP13P45452 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.8□□□□□ -1.32
MMP13P45452 AC006213.6-201ENST00000623722 4179 ntBASIC6.8□□□□□ -1.32
MMP13P45452 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
MMP13P45452 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
MMP13P45452 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
MMP13P45452 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
MMP13P45452 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
MMP13P45452 RNA5SP321-201ENST00000362722 111 ntBASIC6.8□□□□□ -1.32
MMP13P45452 RGS5-202ENST00000367903 934 ntTSL 3 BASIC6.8□□□□□ -1.32
MMP13P45452 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC6.8□□□□□ -1.32
MMP13P45452 AL590635.1-201ENST00000406314 586 ntBASIC6.8□□□□□ -1.32
MMP13P45452 AL049697.3-201ENST00000406493 982 ntBASIC6.8□□□□□ -1.32
MMP13P45452 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.8□□□□□ -1.32
MMP13P45452 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC6.8□□□□□ -1.32
MMP13P45452 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.8□□□□□ -1.32
MMP13P45452 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6.8□□□□□ -1.32
MMP13P45452 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.8□□□□□ -1.32
MMP13P45452 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC6.8□□□□□ -1.32
MMP13P45452 TRIM60P13-201ENST00000432350 1283 ntBASIC6.8□□□□□ -1.32
MMP13P45452 AC083855.1-201ENST00000440041 258 ntBASIC6.8□□□□□ -1.32
MMP13P45452 AL121578.2-201ENST00000448797 447 ntBASIC6.8□□□□□ -1.32
MMP13P45452 RN7SL70P-201ENST00000478322 302 ntBASIC6.8□□□□□ -1.32
MMP13P45452 RN7SL267P-201ENST00000485107 261 ntBASIC6.8□□□□□ -1.32
MMP13P45452 AL390198.2-201ENST00000510553 222 ntBASIC6.8□□□□□ -1.32
MMP13P45452 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC6.8□□□□□ -1.32
MMP13P45452 AK6-204ENST00000512561 587 ntTSL 5 BASIC6.8□□□□□ -1.32
MMP13P45452 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
MMP13P45452 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.8□□□□□ -1.32
MMP13P45452 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC6.8□□□□□ -1.32
MMP13P45452 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC6.8□□□□□ -1.32
MMP13P45452 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC6.8□□□□□ -1.32
MMP13P45452 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
MMP13P45452 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.8□□□□□ -1.32
MMP13P45452 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
MMP13P45452 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC6.8□□□□□ -1.32
MMP13P45452 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC6.8□□□□□ -1.32
MMP13P45452 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.8□□□□□ -1.32
MMP13P45452 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC6.8□□□□□ -1.32
MMP13P45452 AL137246.2-201ENST00000613439 662 ntBASIC6.8□□□□□ -1.32
MMP13P45452 AL352984.2-202ENST00000613699 155 ntBASIC6.8□□□□□ -1.32
MMP13P45452 AF117829.2-201ENST00000619538 361 ntBASIC6.8□□□□□ -1.32
MMP13P45452 AC021422.1-201ENST00000621212 473 ntBASIC6.8□□□□□ -1.32
MMP13P45452 AL035425.4-201ENST00000624509 1063 ntBASIC6.8□□□□□ -1.32
MMP13P45452 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC6.8□□□□□ -1.32
MMP13P45452 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
MMP13P45452 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
MMP13P45452 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.8□□□□□ -1.32
MMP13P45452 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
MMP13P45452 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
MMP13P45452 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
MMP13P45452 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
MMP13P45452 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.79□□□□□ -1.32
MMP13P45452 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.79□□□□□ -1.32
MMP13P45452 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
MMP13P45452 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.79□□□□□ -1.32
MMP13P45452 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
MMP13P45452 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
MMP13P45452 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.79□□□□□ -1.32
MMP13P45452 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.79□□□□□ -1.32
MMP13P45452 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
MMP13P45452 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
MMP13P45452 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
MMP13P45452 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
MMP13P45452 CCDC150P1-201ENST00000537123 2215 ntBASIC6.79□□□□□ -1.32
MMP13P45452 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
MMP13P45452 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
MMP13P45452 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
MMP13P45452 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
MMP13P45452 SNORA38B-201ENST00000363524 131 ntBASIC6.79□□□□□ -1.32
MMP13P45452 SNORD8-201ENST00000363915 110 ntBASIC6.79□□□□□ -1.32
MMP13P45452 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC6.79□□□□□ -1.32
MMP13P45452 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
MMP13P45452 AC116036.1-201ENST00000412199 367 ntBASIC6.79□□□□□ -1.32
MMP13P45452 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC6.79□□□□□ -1.32
MMP13P45452 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms