Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC067942.1-201ENST00000488045 1493 ntBASIC7.01□□□□□ -1.29
SSR1P43307 AC093844.1-201ENST00000514910 1361 ntBASIC7.01□□□□□ -1.29
SSR1P43307 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
SSR1P43307 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SSR1P43307 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
SSR1P43307 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SSR1P43307 RNA5SP333-201ENST00000363466 118 ntBASIC7.01□□□□□ -1.29
SSR1P43307 RNA5SP334-201ENST00000364825 118 ntBASIC7.01□□□□□ -1.29
SSR1P43307 SOD1P1-201ENST00000407803 440 ntBASIC7.01□□□□□ -1.29
SSR1P43307 MICG-208ENST00000416822 132 ntBASIC7.01□□□□□ -1.29
SSR1P43307 AL139415.1-201ENST00000424862 352 ntBASIC7.01□□□□□ -1.29
SSR1P43307 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SSR1P43307 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC7.01□□□□□ -1.29
SSR1P43307 SUMO2P4-201ENST00000504193 276 ntBASIC7.01□□□□□ -1.29
SSR1P43307 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC7.01□□□□□ -1.29
SSR1P43307 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC7.01□□□□□ -1.29
SSR1P43307 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC7.01□□□□□ -1.29
SSR1P43307 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC7.01□□□□□ -1.29
SSR1P43307 AC026774.2-201ENST00000513990 1098 ntBASIC7.01□□□□□ -1.29
SSR1P43307 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC7.01□□□□□ -1.29
SSR1P43307 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC7.01□□□□□ -1.29
SSR1P43307 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SSR1P43307 AC091932.1-201ENST00000569381 427 ntBASIC7.01□□□□□ -1.29
SSR1P43307 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SSR1P43307 OR7A11P-201ENST00000597719 953 ntBASIC7.01□□□□□ -1.29
SSR1P43307 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SSR1P43307 AC012653.2-201ENST00000621880 420 ntBASIC7.01□□□□□ -1.29
SSR1P43307 AC106782.7-201ENST00000624024 418 ntBASIC7.01□□□□□ -1.29
SSR1P43307 AC133555.5-201ENST00000624430 418 ntBASIC7.01□□□□□ -1.29
SSR1P43307 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC7.01□□□□□ -1.29
SSR1P43307 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC7.01□□□□□ -1.29
SSR1P43307 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SSR1P43307 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SSR1P43307 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SSR1P43307 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
SSR1P43307 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SSR1P43307 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC7.01□□□□□ -1.29
SSR1P43307 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SSR1P43307 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
SSR1P43307 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC7.01□□□□□ -1.29
SSR1P43307 AP002370.1-201ENST00000528055 1602 ntBASIC7.01□□□□□ -1.29
SSR1P43307 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC7.01□□□□□ -1.29
SSR1P43307 RBMY1A3P-201ENST00000382670 1404 ntBASIC7.01□□□□□ -1.29
SSR1P43307 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
SSR1P43307 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SSR1P43307 CASC19-228ENST00000641414 1684 ntBASIC7□□□□□ -1.29
SSR1P43307 COG2-209ENST00000534989 2963 ntTSL 2 BASIC7□□□□□ -1.29
SSR1P43307 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC7□□□□□ -1.29
SSR1P43307 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC7□□□□□ -1.29
SSR1P43307 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
SSR1P43307 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SSR1P43307 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
SSR1P43307 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC7□□□□□ -1.29
SSR1P43307 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
SSR1P43307 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC7□□□□□ -1.29
SSR1P43307 AC022905.1-201ENST00000503430 3048 ntBASIC7□□□□□ -1.29
SSR1P43307 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC7□□□□□ -1.29
SSR1P43307 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC7□□□□□ -1.29
SSR1P43307 RNU11-201ENST00000387069 134 ntBASIC7□□□□□ -1.29
SSR1P43307 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC7□□□□□ -1.29
SSR1P43307 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC7□□□□□ -1.29
SSR1P43307 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC7□□□□□ -1.29
SSR1P43307 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC7□□□□□ -1.29
SSR1P43307 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC7□□□□□ -1.29
SSR1P43307 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC7□□□□□ -1.29
SSR1P43307 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC7□□□□□ -1.29
SSR1P43307 SNRPBP1-201ENST00000443634 282 ntBASIC7□□□□□ -1.29
SSR1P43307 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC7□□□□□ -1.29
SSR1P43307 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC7□□□□□ -1.29
SSR1P43307 PFN2-213ENST00000494827 793 ntTSL 4 BASIC7□□□□□ -1.29
SSR1P43307 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC7□□□□□ -1.29
SSR1P43307 AC091849.1-201ENST00000509920 121 ntBASIC7□□□□□ -1.29
SSR1P43307 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC7□□□□□ -1.29
SSR1P43307 AC114940.1-201ENST00000512162 1265 ntBASIC7□□□□□ -1.29
SSR1P43307 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC7□□□□□ -1.29
SSR1P43307 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC7□□□□□ -1.29
SSR1P43307 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC7□□□□□ -1.29
SSR1P43307 OLR1-210ENST00000544577 924 ntTSL 5 BASIC7□□□□□ -1.29
SSR1P43307 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC7□□□□□ -1.29
SSR1P43307 AC091304.4-201ENST00000565703 620 ntBASIC7□□□□□ -1.29
SSR1P43307 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC7□□□□□ -1.29
SSR1P43307 AC091304.5-201ENST00000568969 158 ntBASIC7□□□□□ -1.29
SSR1P43307 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC7□□□□□ -1.29
SSR1P43307 RN7SL270P-201ENST00000579643 281 ntBASIC7□□□□□ -1.29
SSR1P43307 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC7□□□□□ -1.29
SSR1P43307 RPS27AP19-201ENST00000597285 458 ntBASIC7□□□□□ -1.29
SSR1P43307 AL360012.1-201ENST00000602813 131 ntBASIC7□□□□□ -1.29
SSR1P43307 AC025171.4-201ENST00000607250 1047 ntBASIC7□□□□□ -1.29
SSR1P43307 AC012511.1-201ENST00000608140 449 ntBASIC7□□□□□ -1.29
SSR1P43307 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC7□□□□□ -1.29
SSR1P43307 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC7□□□□□ -1.29
SSR1P43307 AC099654.11-201ENST00000638857 294 ntBASIC7□□□□□ -1.29
SSR1P43307 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SSR1P43307 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC7□□□□□ -1.29
SSR1P43307 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
SSR1P43307 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC7□□□□□ -1.29
SSR1P43307 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
SSR1P43307 AC006484.1-201ENST00000435086 1884 ntBASIC7□□□□□ -1.29
SSR1P43307 AC004656.1-201ENST00000568479 4951 ntBASIC7□□□□□ -1.29
SSR1P43307 AL512353.3-201ENST00000417517 1326 ntBASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms