Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 EEF1A1P16-201ENST00000325349 1414 ntBASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 IKZF3-209ENST00000377952 1435 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 AL391380.1-201ENST00000439300 1432 ntBASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 HVCN1-207ENST00000548312 1301 ntTSL 2 BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 CCDC181-202ENST00000367806 1860 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
LINC01558Q9Y6Z2 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
LINC01558Q9Y6Z2 MEST-203ENST00000378576 2180 ntTSL 5 BASIC3.15□□□□□ -1.9
LINC01558Q9Y6Z2 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC3.15□□□□□ -1.9
LINC01558Q9Y6Z2 CDC27P2-201ENST00000425026 1922 ntBASIC3.15□□□□□ -1.9
LINC01558Q9Y6Z2 HDAC1P2-201ENST00000453661 1398 ntBASIC3.15□□□□□ -1.9
LINC01558Q9Y6Z2 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC3.15□□□□□ -1.9
LINC01558Q9Y6Z2 MUC2-202ENST00000613187 4845 ntBASIC3.15□□□□□ -1.9
LINC01558Q9Y6Z2 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
LINC01558Q9Y6Z2 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
LINC01558Q9Y6Z2 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
LINC01558Q9Y6Z2 AIG1-201ENST00000275235 1202 ntTSL 2 BASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 SPATA19-201ENST00000299140 861 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 RN7SKP63-201ENST00000363187 301 ntBASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 SNORA70.3-201ENST00000365075 132 ntBASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 OR2AK2-201ENST00000366480 1154 ntAPPRIS ALT2 BASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 AIF1L-202ENST00000372297 418 ntTSL 3 BASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 IYD-205ENST00000392256 882 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 UBBP1-201ENST00000392399 473 ntBASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 IL6-203ENST00000401651 539 ntTSL 2 BASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 AL365214.1-201ENST00000404237 997 ntBASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 RN7SKP131-201ENST00000410698 301 ntBASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 AC245096.1-201ENST00000413104 546 ntBASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 TRGVA-201ENST00000413819 285 ntBASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 AP001342.1-201ENST00000423389 525 ntBASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 EIF3IP1-201ENST00000433048 967 ntBASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 RBPMSLP-201ENST00000433427 502 ntBASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 AC003989.1-201ENST00000434569 565 ntBASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 AC242426.1-201ENST00000435270 960 ntBASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 AL157385.1-201ENST00000446973 268 ntBASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 AC073587.1-201ENST00000447093 876 ntBASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 LY86-AS1-203ENST00000447858 938 ntTSL 3 BASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 AL591363.1-201ENST00000450091 483 ntBASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 AC092687.2-201ENST00000452909 568 ntTSL 5 BASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 HCG17-214ENST00000453558 732 ntTSL 5 BASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 MRPS21P1-201ENST00000453850 223 ntBASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 AC011225.1-201ENST00000457751 369 ntBASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 DAP3-209ENST00000465375 729 ntTSL 2 BASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 TAF8-205ENST00000465926 1222 ntTSL 2 BASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 RPL7P17-201ENST00000470927 724 ntBASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 RN7SL89P-201ENST00000480252 283 ntBASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 GRHL1-206ENST00000480736 572 ntTSL 4 BASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 RPL23AP80-201ENST00000495605 424 ntBASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 AC106760.2-201ENST00000504159 619 ntBASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 AC021106.2-201ENST00000505310 710 ntBASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 AC020893.2-201ENST00000506083 723 ntBASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 AC109830.1-203ENST00000506638 467 ntTSL 2 BASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 AC012613.1-202ENST00000512647 424 ntTSL 3 BASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 RNA5SP360-201ENST00000516555 118 ntBASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 NACA2-201ENST00000521764 777 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 AC109466.1-203ENST00000524297 1083 ntTSL 3 BASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 RAB30-205ENST00000527633 792 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 KCTD21-AS1-204ENST00000528468 554 ntTSL 4 BASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 AP001999.3-201ENST00000529922 455 ntTSL 2 BASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 OR7E8P-201ENST00000532847 1000 ntBASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 AC079866.1-201ENST00000534985 1220 ntBASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 ATP5J2P4-201ENST00000538774 267 ntBASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 NPIPP1-203ENST00000547107 1071 ntBASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 OR7E105P-201ENST00000555893 993 ntBASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 AC009120.3-201ENST00000563335 499 ntBASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 RRN3-206ENST00000564131 1001 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 AC141586.2-201ENST00000565111 572 ntTSL 3 BASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 AC010531.3-201ENST00000569147 513 ntTSL 4 BASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 AC093525.5-201ENST00000569220 572 ntTSL 3 BASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 AC110921.1-201ENST00000577544 612 ntTSL 3 BASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 RN7SL835P-201ENST00000579920 262 ntBASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 MIR7853-201ENST00000584820 132 ntBASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 NPIPB1P-202ENST00000588786 828 ntBASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 AL445223.1-201ENST00000595998 1051 ntBASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 AC233702.11-201ENST00000598588 333 ntBASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 SLC25A6P5-202ENST00000602729 1038 ntBASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 AC004852.1-201ENST00000605206 154 ntBASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 AC112219.2-201ENST00000608390 532 ntBASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 AC013553.3-201ENST00000612943 615 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms