Protein–RNA interactions for Protein: Q9UKS6

PACSIN3, Protein kinase C and casein kinase substrate in neurons protein 3, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3Q9UKS6 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC6.56□□□□□ -1.36
PACSIN3Q9UKS6 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PACSIN3Q9UKS6 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 AL355377.1-201ENST00000621125 1653 ntBASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 SSXP3-201ENST00000442971 1300 ntBASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 MFSD8-213ENST00000641134 1327 ntBASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 RN7SKP47-201ENST00000365347 328 ntBASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 RNA5SP35-201ENST00000391257 129 ntBASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 AC090114.1-201ENST00000393266 448 ntBASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 ANAPC10P1-201ENST00000395991 556 ntBASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 MEAF6P1-201ENST00000416092 327 ntBASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 AL365338.1-201ENST00000422282 858 ntBASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 LINC01638-202ENST00000444114 637 ntTSL 2 BASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 RPS7P4-201ENST00000444127 582 ntBASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 MTND2P22-201ENST00000444325 1033 ntBASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 AC093799.1-201ENST00000452411 499 ntBASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 SULT1D1P-201ENST00000458020 882 ntBASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 AC104629.2-201ENST00000468627 598 ntBASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 TUBBP11-201ENST00000472255 252 ntBASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 RN7SL776P-201ENST00000493390 268 ntBASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 AC117525.1-201ENST00000515228 503 ntBASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 AC025857.1-201ENST00000525252 377 ntBASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 NDUFA3P2-201ENST00000531434 232 ntBASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 AC135279.1-201ENST00000543493 504 ntBASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 SNHG14-217ENST00000552781 552 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 FAM30C-201ENST00000561158 410 ntBASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 AL953862.2-201ENST00000603089 820 ntBASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 ABI1P1-201ENST00000603375 1120 ntBASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 AL078624.2-201ENST00000605063 554 ntBASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 TEX41-279ENST00000629149 609 ntTSL 5 BASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 ASB8-218ENST00000629941 278 ntTSL 5 BASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 AL356118.1-201ENST00000635272 1078 ntBASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 AC125232.1-201ENST00000452554 1408 ntBASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 AC009779.8-201ENST00000641684 4384 ntBASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 AP001002.1-201ENST00000625148 1513 ntBASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC6.55□□□□□ -1.36
PACSIN3Q9UKS6 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
PACSIN3Q9UKS6 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.54□□□□□ -1.36
PACSIN3Q9UKS6 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PACSIN3Q9UKS6 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.54□□□□□ -1.36
PACSIN3Q9UKS6 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC6.54□□□□□ -1.36
PACSIN3Q9UKS6 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
PACSIN3Q9UKS6 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PACSIN3Q9UKS6 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
PACSIN3Q9UKS6 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
PACSIN3Q9UKS6 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PACSIN3Q9UKS6 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC6.54□□□□□ -1.36
PACSIN3Q9UKS6 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PACSIN3Q9UKS6 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC6.54□□□□□ -1.36
PACSIN3Q9UKS6 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PACSIN3Q9UKS6 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
PACSIN3Q9UKS6 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC6.54□□□□□ -1.36
PACSIN3Q9UKS6 RPL12P1-201ENST00000374520 498 ntBASIC6.54□□□□□ -1.36
PACSIN3Q9UKS6 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PACSIN3Q9UKS6 SOD1P1-201ENST00000407803 440 ntBASIC6.54□□□□□ -1.36
PACSIN3Q9UKS6 RN7SKP188-201ENST00000410789 317 ntBASIC6.54□□□□□ -1.36
PACSIN3Q9UKS6 RN7SKP137-201ENST00000411074 307 ntBASIC6.54□□□□□ -1.36
PACSIN3Q9UKS6 RN7SKP85-201ENST00000411349 318 ntBASIC6.54□□□□□ -1.36
PACSIN3Q9UKS6 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PACSIN3Q9UKS6 CYP4F34P-201ENST00000425951 481 ntBASIC6.54□□□□□ -1.36
PACSIN3Q9UKS6 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC6.54□□□□□ -1.36
PACSIN3Q9UKS6 AC092634.2-201ENST00000428146 1010 ntBASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms