Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC7.76□□□□□ -1.17
CLIP2Q9UDT6 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CLIP2Q9UDT6 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CLIP2Q9UDT6 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC7.76□□□□□ -1.17
CLIP2Q9UDT6 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC7.76□□□□□ -1.17
CLIP2Q9UDT6 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
CLIP2Q9UDT6 AC107977.1-201ENST00000355745 939 ntBASIC7.76□□□□□ -1.17
CLIP2Q9UDT6 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CLIP2Q9UDT6 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
CLIP2Q9UDT6 AC245036.1-201ENST00000391727 309 ntBASIC7.76□□□□□ -1.17
CLIP2Q9UDT6 RNU2-18P-201ENST00000411224 162 ntBASIC7.76□□□□□ -1.17
CLIP2Q9UDT6 RPS21P8-201ENST00000413365 247 ntBASIC7.76□□□□□ -1.17
CLIP2Q9UDT6 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC7.76□□□□□ -1.17
CLIP2Q9UDT6 AL929472.1-201ENST00000417484 429 ntBASIC7.76□□□□□ -1.17
CLIP2Q9UDT6 GPN3P1-201ENST00000423883 535 ntBASIC7.76□□□□□ -1.17
CLIP2Q9UDT6 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC7.76□□□□□ -1.17
CLIP2Q9UDT6 BMP6P1-201ENST00000431230 679 ntBASIC7.76□□□□□ -1.17
CLIP2Q9UDT6 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC7.76□□□□□ -1.17
CLIP2Q9UDT6 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CLIP2Q9UDT6 OR52E7P-201ENST00000452394 933 ntBASIC7.76□□□□□ -1.17
CLIP2Q9UDT6 RN7SL568P-201ENST00000493069 298 ntBASIC7.76□□□□□ -1.17
CLIP2Q9UDT6 RNA5SP116-201ENST00000516132 98 ntBASIC7.76□□□□□ -1.17
CLIP2Q9UDT6 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC7.76□□□□□ -1.17
CLIP2Q9UDT6 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC7.76□□□□□ -1.17
CLIP2Q9UDT6 OR4A41P-201ENST00000533053 928 ntBASIC7.76□□□□□ -1.17
CLIP2Q9UDT6 AC092375.1-201ENST00000550410 637 ntBASIC7.76□□□□□ -1.17
CLIP2Q9UDT6 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC7.76□□□□□ -1.17
CLIP2Q9UDT6 AC121758.1-202ENST00000556917 658 ntBASIC7.76□□□□□ -1.17
CLIP2Q9UDT6 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC7.76□□□□□ -1.17
CLIP2Q9UDT6 MT1CP-201ENST00000567054 174 ntBASIC7.76□□□□□ -1.17
CLIP2Q9UDT6 AP003115.1-201ENST00000569849 463 ntBASIC7.76□□□□□ -1.17
CLIP2Q9UDT6 AC133552.4-201ENST00000576103 676 ntBASIC7.76□□□□□ -1.17
CLIP2Q9UDT6 MIR4301-201ENST00000577203 66 ntBASIC7.76□□□□□ -1.17
CLIP2Q9UDT6 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC7.76□□□□□ -1.17
CLIP2Q9UDT6 AC093635.1-201ENST00000609028 555 ntBASIC7.76□□□□□ -1.17
CLIP2Q9UDT6 AL354718.1-201ENST00000619764 589 ntBASIC7.76□□□□□ -1.17
CLIP2Q9UDT6 AC120057.5-201ENST00000623840 154 ntBASIC7.76□□□□□ -1.17
CLIP2Q9UDT6 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
CLIP2Q9UDT6 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
CLIP2Q9UDT6 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
CLIP2Q9UDT6 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CLIP2Q9UDT6 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
CLIP2Q9UDT6 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CLIP2Q9UDT6 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
CLIP2Q9UDT6 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CLIP2Q9UDT6 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
CLIP2Q9UDT6 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CLIP2Q9UDT6 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CLIP2Q9UDT6 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CLIP2Q9UDT6 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
CLIP2Q9UDT6 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
CLIP2Q9UDT6 TNPO1P2-201ENST00000426249 2665 ntBASIC7.75□□□□□ -1.17
CLIP2Q9UDT6 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
CLIP2Q9UDT6 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
CLIP2Q9UDT6 AL359694.2-201ENST00000567753 1615 ntBASIC7.75□□□□□ -1.17
CLIP2Q9UDT6 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
CLIP2Q9UDT6 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
CLIP2Q9UDT6 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC7.75□□□□□ -1.17
CLIP2Q9UDT6 MRPS6P2-201ENST00000381143 370 ntBASIC7.75□□□□□ -1.17
CLIP2Q9UDT6 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC7.75□□□□□ -1.17
CLIP2Q9UDT6 AKR1B10P1-201ENST00000425765 942 ntBASIC7.75□□□□□ -1.17
CLIP2Q9UDT6 RPSAP32-201ENST00000432681 526 ntBASIC7.75□□□□□ -1.17
CLIP2Q9UDT6 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC7.75□□□□□ -1.17
CLIP2Q9UDT6 AL020997.1-201ENST00000446554 349 ntBASIC7.75□□□□□ -1.17
CLIP2Q9UDT6 TVP23CP1-201ENST00000450317 639 ntBASIC7.75□□□□□ -1.17
CLIP2Q9UDT6 SULT1D1P-201ENST00000458020 882 ntBASIC7.75□□□□□ -1.17
CLIP2Q9UDT6 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC7.75□□□□□ -1.17
CLIP2Q9UDT6 APOBEC3AP1-201ENST00000511396 287 ntBASIC7.75□□□□□ -1.17
CLIP2Q9UDT6 AC024405.1-201ENST00000532521 1042 ntBASIC7.75□□□□□ -1.17
CLIP2Q9UDT6 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC7.75□□□□□ -1.17
CLIP2Q9UDT6 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC7.75□□□□□ -1.17
CLIP2Q9UDT6 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CLIP2Q9UDT6 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC7.75□□□□□ -1.17
CLIP2Q9UDT6 AL359091.2-201ENST00000609303 556 ntBASIC7.75□□□□□ -1.17
CLIP2Q9UDT6 AL589743.6-201ENST00000611025 117 ntBASIC7.75□□□□□ -1.17
CLIP2Q9UDT6 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC7.75□□□□□ -1.17
CLIP2Q9UDT6 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC7.75□□□□□ -1.17
CLIP2Q9UDT6 AL139384.2-201ENST00000613809 3590 ntBASIC7.75□□□□□ -1.17
CLIP2Q9UDT6 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
CLIP2Q9UDT6 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
CLIP2Q9UDT6 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
CLIP2Q9UDT6 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC7.75□□□□□ -1.17
CLIP2Q9UDT6 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC7.75□□□□□ -1.17
CLIP2Q9UDT6 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC7.75□□□□□ -1.17
CLIP2Q9UDT6 AC022613.3-201ENST00000560740 1346 ntBASIC7.75□□□□□ -1.17
CLIP2Q9UDT6 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CLIP2Q9UDT6 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CLIP2Q9UDT6 GLYATL1P1-201ENST00000528297 1607 ntBASIC7.74□□□□□ -1.17
CLIP2Q9UDT6 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC7.74□□□□□ -1.17
CLIP2Q9UDT6 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CLIP2Q9UDT6 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC7.74□□□□□ -1.17
CLIP2Q9UDT6 AC013488.1-201ENST00000526618 1838 ntBASIC7.74□□□□□ -1.17
CLIP2Q9UDT6 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC7.74□□□□□ -1.17
CLIP2Q9UDT6 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
CLIP2Q9UDT6 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CLIP2Q9UDT6 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
CLIP2Q9UDT6 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
CLIP2Q9UDT6 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
CLIP2Q9UDT6 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
CLIP2Q9UDT6 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC7.74□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms