Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AL954705.1-201ENST00000435277 559 ntBASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 CHCHD4P5-201ENST00000436684 427 ntBASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 AC002066.1-202ENST00000439070 699 ntTSL 3 BASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 AC123904.1-201ENST00000441072 368 ntBASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 AL353803.3-201ENST00000444641 335 ntBASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 CDC42P2-201ENST00000448566 569 ntBASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 RPS7P7-201ENST00000463499 571 ntBASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 RPL21P18-201ENST00000469899 480 ntBASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 AP000805.1-201ENST00000471604 784 ntBASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 MRPL49P1-201ENST00000505951 535 ntBASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 HMGB1P47-201ENST00000511281 589 ntBASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 FABP5P12-201ENST00000515543 389 ntBASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 RNU6-1129P-201ENST00000515964 104 ntBASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 RN7SKP242-201ENST00000515967 289 ntBASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 AF279873.3-204ENST00000523336 784 ntTSL 2 BASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 AL358334.3-201ENST00000557343 535 ntTSL 3 BASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 AC091304.5-201ENST00000568969 158 ntBASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 DHFRP1-201ENST00000579682 559 ntBASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 ZNF415P1-201ENST00000582279 1166 ntBASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 RN7SL697P-201ENST00000582484 299 ntBASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 FAM60CP-201ENST00000591086 664 ntBASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 AC108451.2-201ENST00000603875 538 ntBASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 AP003973.1-201ENST00000604639 691 ntBASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 AL353621.2-201ENST00000605340 133 ntBASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 AC007349.4-201ENST00000608114 532 ntBASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 AC131235.4-201ENST00000609288 620 ntBASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 AC009163.6-201ENST00000612367 342 ntBASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 AL445649.1-201ENST00000615941 691 ntBASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 VN1R7P-201ENST00000619242 903 ntBASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 AL158062.1-201ENST00000619632 745 ntBASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 AC091059.2-201ENST00000623355 614 ntBASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 AL359740.1-201ENST00000624340 592 ntBASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 AC104073.4-201ENST00000632111 598 ntTSL 2 BASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 AC138627.1-203ENST00000641872 1680 ntBASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 FAR2-202ENST00000536681 3616 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 OR2T11-202ENST00000641193 3770 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 CRBN-203ENST00000432408 2203 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 IQCA1-204ENST00000409907 3281 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 AC126773.4-201ENST00000612545 3043 ntBASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 IL12B-201ENST00000231228 2761 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 ZNF736P9Y-201ENST00000439586 1345 ntBASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 THAP12P8-201ENST00000447914 2115 ntBASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 AC245505.2-201ENST00000553572 3055 ntBASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 RGS6-205ENST00000406236 1476 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SSBP3Q9BWW4 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
SSBP3Q9BWW4 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
SSBP3Q9BWW4 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
SSBP3Q9BWW4 AL353795.1-201ENST00000439134 1775 ntBASIC6.21□□□□□ -1.41
SSBP3Q9BWW4 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
SSBP3Q9BWW4 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC6.21□□□□□ -1.41
SSBP3Q9BWW4 IFNA13-202ENST00000610660 1539 ntAPPRIS P2 BASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 RN7SKP63-201ENST00000363187 301 ntBASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 MIR498-201ENST00000385134 124 ntBASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 RN7SKP131-201ENST00000410698 301 ntBASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 RAP1BP1-201ENST00000412709 553 ntBASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 AL008987.1-201ENST00000415528 237 ntBASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 AC020983.1-201ENST00000417063 543 ntBASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 AL109924.2-201ENST00000419800 934 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 RPSAP1-201ENST00000421328 880 ntBASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 AC006366.1-201ENST00000422002 759 ntBASIC6.21□□□□□ -1.42
SSBP3Q9BWW4 MTND4P20-201ENST00000424125 869 ntBASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms