Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AL121835.1-201ENST00000404250 354 ntBASIC6.31□□□□□ -1.4
CCDC28BQ9BUN5 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.31□□□□□ -1.4
CCDC28BQ9BUN5 LINC02470-201ENST00000412084 979 ntTSL 2 BASIC6.31□□□□□ -1.4
CCDC28BQ9BUN5 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC6.31□□□□□ -1.4
CCDC28BQ9BUN5 SNX18P13-201ENST00000412442 529 ntBASIC6.31□□□□□ -1.4
CCDC28BQ9BUN5 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC28BQ9BUN5 SPATA20P1-201ENST00000423089 438 ntBASIC6.31□□□□□ -1.4
CCDC28BQ9BUN5 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.31□□□□□ -1.4
CCDC28BQ9BUN5 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.31□□□□□ -1.4
CCDC28BQ9BUN5 AC022400.2-201ENST00000446730 866 ntTSL 2 BASIC6.31□□□□□ -1.4
CCDC28BQ9BUN5 AC103563.5-201ENST00000455643 364 ntBASIC6.31□□□□□ -1.4
CCDC28BQ9BUN5 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.31□□□□□ -1.4
CCDC28BQ9BUN5 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.31□□□□□ -1.4
CCDC28BQ9BUN5 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.31□□□□□ -1.4
CCDC28BQ9BUN5 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC6.31□□□□□ -1.4
CCDC28BQ9BUN5 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC6.31□□□□□ -1.4
CCDC28BQ9BUN5 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC28BQ9BUN5 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.31□□□□□ -1.4
CCDC28BQ9BUN5 OR4A40P-201ENST00000533878 948 ntBASIC6.31□□□□□ -1.4
CCDC28BQ9BUN5 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC6.31□□□□□ -1.4
CCDC28BQ9BUN5 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC6.31□□□□□ -1.4
CCDC28BQ9BUN5 ANP32BP1-202ENST00000568553 737 ntBASIC6.31□□□□□ -1.4
CCDC28BQ9BUN5 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.31□□□□□ -1.4
CCDC28BQ9BUN5 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CCDC28BQ9BUN5 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.31□□□□□ -1.4
CCDC28BQ9BUN5 AC025857.2-201ENST00000602711 238 ntBASIC6.31□□□□□ -1.4
CCDC28BQ9BUN5 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.31□□□□□ -1.4
CCDC28BQ9BUN5 BX005040.2-201ENST00000620504 370 ntBASIC6.31□□□□□ -1.4
CCDC28BQ9BUN5 MRPL57P1-201ENST00000621486 265 ntBASIC6.31□□□□□ -1.4
CCDC28BQ9BUN5 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC6.31□□□□□ -1.4
CCDC28BQ9BUN5 AC000095.2-202ENST00000637415 154 ntBASIC6.31□□□□□ -1.4
CCDC28BQ9BUN5 KCNJ10-204ENST00000637644 1239 ntTSL 5 BASIC6.31□□□□□ -1.4
CCDC28BQ9BUN5 OR5P3-202ENST00000641167 1193 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CCDC28BQ9BUN5 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC28BQ9BUN5 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
CCDC28BQ9BUN5 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
CCDC28BQ9BUN5 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC28BQ9BUN5 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC28BQ9BUN5 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC28BQ9BUN5 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC28BQ9BUN5 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.31□□□□□ -1.4
CCDC28BQ9BUN5 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
CCDC28BQ9BUN5 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC28BQ9BUN5 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC28BQ9BUN5 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC28BQ9BUN5 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC28BQ9BUN5 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
CCDC28BQ9BUN5 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC28BQ9BUN5 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.3□□□□□ -1.4
CCDC28BQ9BUN5 AC023886.2-201ENST00000321285 411 ntBASIC6.3□□□□□ -1.4
CCDC28BQ9BUN5 WFDC10B-202ENST00000335769 475 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC28BQ9BUN5 AL359694.1-201ENST00000403247 604 ntBASIC6.3□□□□□ -1.4
CCDC28BQ9BUN5 RPL31-203ENST00000409028 1110 ntTSL 2 BASIC6.3□□□□□ -1.4
CCDC28BQ9BUN5 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC28BQ9BUN5 AL359092.1-201ENST00000417156 265 ntBASIC6.3□□□□□ -1.4
CCDC28BQ9BUN5 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC6.3□□□□□ -1.4
CCDC28BQ9BUN5 NPM1P25-201ENST00000429734 854 ntBASIC6.3□□□□□ -1.4
CCDC28BQ9BUN5 AC007790.1-201ENST00000439081 782 ntBASIC6.3□□□□□ -1.4
CCDC28BQ9BUN5 PRKAR1AP1-201ENST00000441422 1162 ntBASIC6.3□□□□□ -1.4
CCDC28BQ9BUN5 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC6.3□□□□□ -1.4
CCDC28BQ9BUN5 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.3□□□□□ -1.4
CCDC28BQ9BUN5 RN7SL390P-201ENST00000470634 284 ntBASIC6.3□□□□□ -1.4
CCDC28BQ9BUN5 AC022415.1-202ENST00000486612 523 ntBASIC6.3□□□□□ -1.4
CCDC28BQ9BUN5 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
CCDC28BQ9BUN5 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC6.3□□□□□ -1.4
CCDC28BQ9BUN5 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC6.3□□□□□ -1.4
CCDC28BQ9BUN5 AC021820.1-201ENST00000525564 808 ntBASIC6.3□□□□□ -1.4
CCDC28BQ9BUN5 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC28BQ9BUN5 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC6.3□□□□□ -1.4
CCDC28BQ9BUN5 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.3□□□□□ -1.4
CCDC28BQ9BUN5 OR4H6P-201ENST00000563771 921 ntBASIC6.3□□□□□ -1.4
CCDC28BQ9BUN5 AP005328.1-201ENST00000577719 681 ntTSL 3 BASIC6.3□□□□□ -1.4
CCDC28BQ9BUN5 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC6.3□□□□□ -1.4
CCDC28BQ9BUN5 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC6.3□□□□□ -1.4
CCDC28BQ9BUN5 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.3□□□□□ -1.4
CCDC28BQ9BUN5 ZNF473-209ENST00000601364 603 ntTSL 3 BASIC6.3□□□□□ -1.4
CCDC28BQ9BUN5 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC6.3□□□□□ -1.4
CCDC28BQ9BUN5 FRG2MP-201ENST00000613317 856 ntBASIC6.3□□□□□ -1.4
CCDC28BQ9BUN5 HBG1-202ENST00000632727 369 ntTSL 3 BASIC6.3□□□□□ -1.4
CCDC28BQ9BUN5 AC135068.11-201ENST00000636378 921 ntBASIC6.3□□□□□ -1.4
CCDC28BQ9BUN5 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC28BQ9BUN5 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
CCDC28BQ9BUN5 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC28BQ9BUN5 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.3□□□□□ -1.4
CCDC28BQ9BUN5 AL359976.1-201ENST00000418655 3528 ntBASIC6.3□□□□□ -1.4
CCDC28BQ9BUN5 CASC19-260ENST00000641828 2001 ntBASIC6.3□□□□□ -1.4
CCDC28BQ9BUN5 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
CCDC28BQ9BUN5 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC28BQ9BUN5 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC28BQ9BUN5 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC28BQ9BUN5 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
CCDC28BQ9BUN5 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
CCDC28BQ9BUN5 UBBP1-201ENST00000392399 473 ntBASIC6.29□□□□□ -1.4
CCDC28BQ9BUN5 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC28BQ9BUN5 AC064874.1-201ENST00000409661 441 ntTSL 3 BASIC6.29□□□□□ -1.4
CCDC28BQ9BUN5 U3.43-201ENST00000410734 213 ntBASIC6.29□□□□□ -1.4
CCDC28BQ9BUN5 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC6.29□□□□□ -1.4
CCDC28BQ9BUN5 RPL23AP85-201ENST00000421838 433 ntBASIC6.29□□□□□ -1.4
CCDC28BQ9BUN5 AL354766.1-201ENST00000423396 542 ntBASIC6.29□□□□□ -1.4
CCDC28BQ9BUN5 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms