Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
CDK5RAP3Q96JB5 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC7.5□□□□□ -1.21
CDK5RAP3Q96JB5 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CDK5RAP3Q96JB5 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC7.5□□□□□ -1.21
CDK5RAP3Q96JB5 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
CDK5RAP3Q96JB5 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC7.5□□□□□ -1.21
CDK5RAP3Q96JB5 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CDK5RAP3Q96JB5 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
CDK5RAP3Q96JB5 RNA5SP382-201ENST00000363355 112 ntBASIC7.5□□□□□ -1.21
CDK5RAP3Q96JB5 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC7.5□□□□□ -1.21
CDK5RAP3Q96JB5 RNU6-891P-201ENST00000384280 111 ntBASIC7.5□□□□□ -1.21
CDK5RAP3Q96JB5 ZNF37CP-201ENST00000406795 241 ntBASIC7.5□□□□□ -1.21
CDK5RAP3Q96JB5 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC7.5□□□□□ -1.21
CDK5RAP3Q96JB5 RN7SKP188-201ENST00000410789 317 ntBASIC7.5□□□□□ -1.21
CDK5RAP3Q96JB5 ZNF736P1Y-201ENST00000440402 1276 ntBASIC7.5□□□□□ -1.21
CDK5RAP3Q96JB5 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC7.5□□□□□ -1.21
CDK5RAP3Q96JB5 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC7.5□□□□□ -1.21
CDK5RAP3Q96JB5 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC7.5□□□□□ -1.21
CDK5RAP3Q96JB5 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC7.5□□□□□ -1.21
CDK5RAP3Q96JB5 RPL26P30-201ENST00000453533 435 ntBASIC7.5□□□□□ -1.21
CDK5RAP3Q96JB5 RN7SKP198-201ENST00000459286 306 ntBASIC7.5□□□□□ -1.21
CDK5RAP3Q96JB5 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CDK5RAP3Q96JB5 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC7.5□□□□□ -1.21
CDK5RAP3Q96JB5 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC7.5□□□□□ -1.21
CDK5RAP3Q96JB5 AL390198.2-201ENST00000510553 222 ntBASIC7.5□□□□□ -1.21
CDK5RAP3Q96JB5 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CDK5RAP3Q96JB5 SFTA3-210ENST00000521945 1116 ntTSL 2 BASIC7.5□□□□□ -1.21
CDK5RAP3Q96JB5 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC7.5□□□□□ -1.21
CDK5RAP3Q96JB5 AP002004.1-206ENST00000532441 876 ntBASIC7.5□□□□□ -1.21
CDK5RAP3Q96JB5 AC007068.2-201ENST00000543168 395 ntBASIC7.5□□□□□ -1.21
CDK5RAP3Q96JB5 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC7.5□□□□□ -1.21
CDK5RAP3Q96JB5 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC7.5□□□□□ -1.21
CDK5RAP3Q96JB5 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC7.5□□□□□ -1.21
CDK5RAP3Q96JB5 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC7.5□□□□□ -1.21
CDK5RAP3Q96JB5 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC7.5□□□□□ -1.21
CDK5RAP3Q96JB5 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC7.5□□□□□ -1.21
CDK5RAP3Q96JB5 RPS11-205ENST00000599561 430 ntTSL 5 BASIC7.5□□□□□ -1.21
CDK5RAP3Q96JB5 AL953862.2-201ENST00000603089 820 ntBASIC7.5□□□□□ -1.21
CDK5RAP3Q96JB5 AL359704.2-201ENST00000604335 521 ntBASIC7.5□□□□□ -1.21
CDK5RAP3Q96JB5 AC092574.1-201ENST00000609771 420 ntBASIC7.5□□□□□ -1.21
CDK5RAP3Q96JB5 AL450226.2-201ENST00000622913 439 ntBASIC7.5□□□□□ -1.21
CDK5RAP3Q96JB5 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC7.5□□□□□ -1.21
CDK5RAP3Q96JB5 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC7.5□□□□□ -1.21
CDK5RAP3Q96JB5 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CDK5RAP3Q96JB5 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC7.5□□□□□ -1.21
CDK5RAP3Q96JB5 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CDK5RAP3Q96JB5 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC7.5□□□□□ -1.21
CDK5RAP3Q96JB5 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC7.5□□□□□ -1.21
CDK5RAP3Q96JB5 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
CDK5RAP3Q96JB5 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CDK5RAP3Q96JB5 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CDK5RAP3Q96JB5 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC7.49□□□□□ -1.21
CDK5RAP3Q96JB5 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CDK5RAP3Q96JB5 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC7.49□□□□□ -1.21
CDK5RAP3Q96JB5 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CDK5RAP3Q96JB5 CAST-202ENST00000325674 3356 ntTSL 5 BASIC7.49□□□□□ -1.21
CDK5RAP3Q96JB5 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC7.49□□□□□ -1.21
CDK5RAP3Q96JB5 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CDK5RAP3Q96JB5 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
CDK5RAP3Q96JB5 OR2M1P-201ENST00000318104 951 ntBASIC7.49□□□□□ -1.21
CDK5RAP3Q96JB5 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
CDK5RAP3Q96JB5 RN7SKP191-201ENST00000364713 306 ntBASIC7.49□□□□□ -1.21
CDK5RAP3Q96JB5 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC7.49□□□□□ -1.21
CDK5RAP3Q96JB5 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC7.49□□□□□ -1.21
CDK5RAP3Q96JB5 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC7.49□□□□□ -1.21
CDK5RAP3Q96JB5 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC7.49□□□□□ -1.21
CDK5RAP3Q96JB5 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CDK5RAP3Q96JB5 HMGN1P8-201ENST00000463578 288 ntBASIC7.49□□□□□ -1.21
CDK5RAP3Q96JB5 AC018639.1-201ENST00000492994 442 ntBASIC7.49□□□□□ -1.21
CDK5RAP3Q96JB5 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC7.49□□□□□ -1.21
CDK5RAP3Q96JB5 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC7.49□□□□□ -1.21
CDK5RAP3Q96JB5 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC7.49□□□□□ -1.21
CDK5RAP3Q96JB5 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC7.49□□□□□ -1.21
CDK5RAP3Q96JB5 AC106785.4-201ENST00000569492 412 ntBASIC7.49□□□□□ -1.21
CDK5RAP3Q96JB5 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC7.49□□□□□ -1.21
CDK5RAP3Q96JB5 AC005899.7-201ENST00000618199 588 ntBASIC7.49□□□□□ -1.21
CDK5RAP3Q96JB5 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC7.49□□□□□ -1.21
CDK5RAP3Q96JB5 AC027559.1-201ENST00000636288 271 ntBASIC7.49□□□□□ -1.21
CDK5RAP3Q96JB5 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
CDK5RAP3Q96JB5 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
CDK5RAP3Q96JB5 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC7.49□□□□□ -1.21
CDK5RAP3Q96JB5 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC7.49□□□□□ -1.21
CDK5RAP3Q96JB5 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CDK5RAP3Q96JB5 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CDK5RAP3Q96JB5 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
CDK5RAP3Q96JB5 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CDK5RAP3Q96JB5 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC7.49□□□□□ -1.21
CDK5RAP3Q96JB5 AC009120.2-204ENST00000621548 2032 ntBASIC7.49□□□□□ -1.21
CDK5RAP3Q96JB5 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CDK5RAP3Q96JB5 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
CDK5RAP3Q96JB5 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC7.49□□□□□ -1.21
CDK5RAP3Q96JB5 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC7.49□□□□□ -1.21
CDK5RAP3Q96JB5 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CDK5RAP3Q96JB5 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC7.48□□□□□ -1.21
CDK5RAP3Q96JB5 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CDK5RAP3Q96JB5 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
CDK5RAP3Q96JB5 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC7.48□□□□□ -1.21
CDK5RAP3Q96JB5 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC7.48□□□□□ -1.21
CDK5RAP3Q96JB5 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
CDK5RAP3Q96JB5 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms