Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 PTGS2-201ENST00000367468 4514 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 BCL6-201ENST00000232014 2710 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 FBXO30-201ENST00000237281 9009 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 UGT2B28-201ENST00000335568 1833 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 FCGR2A-202ENST00000367972 1399 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 RIPOR2-206ENST00000538035 5389 ntTSL 2 BASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 LRRC37A9P-201ENST00000603850 5376 ntBASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 ENTPD1-AS1-211ENST00000454638 2933 ntTSL 2 BASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 CAGE1-202ENST00000338150 2771 ntAPPRIS ALT2 TSL 2 BASIC7.82□□□□□ -1.16
DEPDC4Q8N2C3 ARMC3-203ENST00000409049 2479 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 CD44-208ENST00000428726 3046 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 NR1I3-205ENST00000367983 1473 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 MMADHC-202ENST00000422782 1462 ntTSL 5 BASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 CREM-208ENST00000361599 2170 ntTSL 5 BASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 KIAA1217-201ENST00000307544 3281 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 AC055716.2-201ENST00000552545 2441 ntBASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 AC016831.3-201ENST00000446451 1723 ntBASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 GTF2H2B-203ENST00000508065 1432 ntBASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 CYFIP2-221ENST00000618329 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 HEATR9-204ENST00000603870 1829 ntAPPRIS ALT2 TSL 2 BASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 KRTAP11-1-201ENST00000332378 912 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 MIR146B-201ENST00000365699 73 ntBASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 RPL21P107-201ENST00000411449 460 ntBASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 LINC02539-201ENST00000411615 737 ntTSL 2 BASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 AC006547.2-201ENST00000412713 526 ntTSL 4 BASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 AL390840.1-201ENST00000420303 988 ntBASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 CDY14P-201ENST00000431260 1014 ntBASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 AC009988.1-201ENST00000434988 310 ntTSL 5 BASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 SNX18P2-201ENST00000438540 808 ntBASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 P2RX6P-201ENST00000439119 468 ntTSL 3 BASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 CDY23P-201ENST00000451661 1014 ntBASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 AL606490.1-201ENST00000452266 765 ntBASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 RN7SL401P-201ENST00000470065 298 ntBASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 AC108114.1-201ENST00000477321 437 ntBASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 AC092943.1-201ENST00000485389 878 ntBASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 RN7SL580P-201ENST00000492489 287 ntBASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 NR1I3-219ENST00000504010 944 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 AC122718.2-201ENST00000505325 591 ntBASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 AF186996.2-201ENST00000508347 907 ntBASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 RPL7L1P4-201ENST00000513004 707 ntBASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 AC093281.1-201ENST00000514239 549 ntBASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 LINC00967-202ENST00000517725 259 ntTSL 2 BASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 IGLV3-29-201ENST00000520084 244 ntBASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 AP001767.2-201ENST00000527291 382 ntBASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 AP001646.1-201ENST00000527936 915 ntBASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 ST3GAL3-237ENST00000533933 834 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 LINC00520-204ENST00000556417 778 ntTSL 3 BASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 MIR8075-201ENST00000614354 80 ntBASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 AC007014.2-201ENST00000615581 479 ntBASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 MIR7113-201ENST00000621222 59 ntBASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 AL355987.5-201ENST00000621585 411 ntBASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 OR12D2-206ENST00000623183 1069 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 OR1B1-201ENST00000623530 995 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 AL356596.1-201ENST00000624230 379 ntBASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 TMEM182-211ENST00000640575 1155 ntTSL 5 BASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 OR5H6-203ENST00000642105 978 ntBASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 ZNF415-213ENST00000597503 2469 ntTSL 2 BASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 NEK10-201ENST00000295720 2871 ntTSL 2 BASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 CABLES1-202ENST00000400473 1544 ntAPPRIS ALT2 TSL 2 BASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 ZNF708-201ENST00000356929 4004 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 RRN3-203ENST00000429751 2198 ntTSL 2 BASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 GOLGA8B-202ENST00000438958 4252 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 MTND5P26-201ENST00000426018 1752 ntBASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 AL079343.1-201ENST00000572358 1771 ntBASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 AC009948.3-201ENST00000603415 1798 ntBASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 NLRC4-201ENST00000342905 1362 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 GLYATL2-201ENST00000287275 1640 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 LINC02026-201ENST00000397645 1615 ntTSL 2 BASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 CLOCK-202ENST00000381322 4059 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC7.81□□□□□ -1.16
DEPDC4Q8N2C3 TBX5-AS1-201ENST00000528549 3620 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
DEPDC4Q8N2C3 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC7.8□□□□□ -1.16
DEPDC4Q8N2C3 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms