Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
H3F3AP84243 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
H3F3AP84243 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
H3F3AP84243 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
H3F3AP84243 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC5.85□□□□□ -1.47
H3F3AP84243 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
H3F3AP84243 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
H3F3AP84243 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
H3F3AP84243 AC004014.2-201ENST00000623718 5122 ntBASIC5.85□□□□□ -1.47
H3F3AP84243 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
H3F3AP84243 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC5.85□□□□□ -1.47
H3F3AP84243 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
H3F3AP84243 AP002833.3-201ENST00000625075 2265 ntBASIC5.85□□□□□ -1.47
H3F3AP84243 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC5.84□□□□□ -1.47
H3F3AP84243 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
H3F3AP84243 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
H3F3AP84243 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
H3F3AP84243 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.84□□□□□ -1.47
H3F3AP84243 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
H3F3AP84243 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
H3F3AP84243 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC5.84□□□□□ -1.47
H3F3AP84243 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
H3F3AP84243 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
H3F3AP84243 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
H3F3AP84243 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC5.84□□□□□ -1.47
H3F3AP84243 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
H3F3AP84243 RNA5SP85-201ENST00000365378 119 ntBASIC5.84□□□□□ -1.47
H3F3AP84243 AL033519.1-201ENST00000407266 307 ntBASIC5.84□□□□□ -1.47
H3F3AP84243 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.84□□□□□ -1.47
H3F3AP84243 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
H3F3AP84243 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC5.84□□□□□ -1.47
H3F3AP84243 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC5.84□□□□□ -1.47
H3F3AP84243 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
H3F3AP84243 AC064862.5-201ENST00000440618 334 ntBASIC5.84□□□□□ -1.47
H3F3AP84243 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.84□□□□□ -1.47
H3F3AP84243 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.84□□□□□ -1.47
H3F3AP84243 H3F3AP3-201ENST00000497682 407 ntBASIC5.84□□□□□ -1.47
H3F3AP84243 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC5.84□□□□□ -1.47
H3F3AP84243 AC113191.1-201ENST00000517759 403 ntBASIC5.84□□□□□ -1.47
H3F3AP84243 SUMO2P19-201ENST00000518920 295 ntBASIC5.84□□□□□ -1.47
H3F3AP84243 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC5.84□□□□□ -1.47
H3F3AP84243 AP004607.6-201ENST00000525033 1202 ntBASIC5.84□□□□□ -1.47
H3F3AP84243 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC5.84□□□□□ -1.47
H3F3AP84243 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC5.84□□□□□ -1.47
H3F3AP84243 OR9G2P-201ENST00000533326 880 ntBASIC5.84□□□□□ -1.47
H3F3AP84243 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC5.84□□□□□ -1.47
H3F3AP84243 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
H3F3AP84243 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC5.84□□□□□ -1.47
H3F3AP84243 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
H3F3AP84243 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC5.84□□□□□ -1.47
H3F3AP84243 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC5.84□□□□□ -1.47
H3F3AP84243 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC5.84□□□□□ -1.47
H3F3AP84243 AC004805.3-201ENST00000603178 310 ntBASIC5.84□□□□□ -1.47
H3F3AP84243 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.84□□□□□ -1.47
H3F3AP84243 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC5.84□□□□□ -1.47
H3F3AP84243 MIR6503-201ENST00000622884 86 ntBASIC5.84□□□□□ -1.47
H3F3AP84243 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
H3F3AP84243 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
H3F3AP84243 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
H3F3AP84243 AP002370.1-201ENST00000528055 1602 ntBASIC5.84□□□□□ -1.47
H3F3AP84243 AC023245.2-201ENST00000530760 2978 ntBASIC5.84□□□□□ -1.48
H3F3AP84243 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
H3F3AP84243 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC5.84□□□□□ -1.48
H3F3AP84243 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.48
H3F3AP84243 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
H3F3AP84243 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
H3F3AP84243 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC5.84□□□□□ -1.48
H3F3AP84243 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
H3F3AP84243 PARP4P1-201ENST00000435945 2337 ntBASIC5.83□□□□□ -1.48
H3F3AP84243 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.83□□□□□ -1.48
H3F3AP84243 AC112243.1-201ENST00000623949 3851 ntBASIC5.83□□□□□ -1.48
H3F3AP84243 AC022905.1-201ENST00000503430 3048 ntBASIC5.83□□□□□ -1.48
H3F3AP84243 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
H3F3AP84243 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC5.83□□□□□ -1.48
H3F3AP84243 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
H3F3AP84243 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
H3F3AP84243 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
H3F3AP84243 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
H3F3AP84243 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
H3F3AP84243 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
H3F3AP84243 AL355377.1-201ENST00000621125 1653 ntBASIC5.83□□□□□ -1.48
H3F3AP84243 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
H3F3AP84243 MIR551B-201ENST00000384984 96 ntBASIC5.83□□□□□ -1.48
H3F3AP84243 RPL7P58-201ENST00000402913 758 ntBASIC5.83□□□□□ -1.48
H3F3AP84243 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC5.83□□□□□ -1.48
H3F3AP84243 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC5.83□□□□□ -1.48
H3F3AP84243 MED28P4-201ENST00000433137 572 ntBASIC5.83□□□□□ -1.48
H3F3AP84243 CEACAMP11-201ENST00000455211 583 ntBASIC5.83□□□□□ -1.48
H3F3AP84243 RN7SL393P-201ENST00000463588 296 ntBASIC5.83□□□□□ -1.48
H3F3AP84243 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
H3F3AP84243 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
H3F3AP84243 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.83□□□□□ -1.48
H3F3AP84243 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.83□□□□□ -1.48
H3F3AP84243 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC5.83□□□□□ -1.48
H3F3AP84243 AC084337.1-201ENST00000524809 686 ntBASIC5.83□□□□□ -1.48
H3F3AP84243 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
H3F3AP84243 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC5.83□□□□□ -1.48
H3F3AP84243 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC5.83□□□□□ -1.48
H3F3AP84243 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC5.83□□□□□ -1.48
H3F3AP84243 MIR744-201ENST00000578242 98 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms