Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC4.46□□□□□ -1.7
RPL39P62891 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
RPL39P62891 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RPL39P62891 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC4.45□□□□□ -1.7
RPL39P62891 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RPL39P62891 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
RPL39P62891 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RPL39P62891 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC4.45□□□□□ -1.7
RPL39P62891 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RPL39P62891 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RPL39P62891 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC4.45□□□□□ -1.7
RPL39P62891 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
RPL39P62891 LRRC37A15P-201ENST00000514785 1355 ntBASIC4.45□□□□□ -1.7
RPL39P62891 AC096921.2-201ENST00000561507 1916 ntBASIC4.45□□□□□ -1.7
RPL39P62891 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC4.45□□□□□ -1.7
RPL39P62891 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RPL39P62891 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RPL39P62891 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RPL39P62891 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
RPL39P62891 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
RPL39P62891 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RPL39P62891 RNA5SP301-201ENST00000362537 121 ntBASIC4.45□□□□□ -1.7
RPL39P62891 RNA5SP321-201ENST00000362722 111 ntBASIC4.45□□□□□ -1.7
RPL39P62891 MIR433-201ENST00000384837 93 ntBASIC4.45□□□□□ -1.7
RPL39P62891 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC4.45□□□□□ -1.7
RPL39P62891 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
RPL39P62891 RPL31-203ENST00000409028 1110 ntTSL 2 BASIC4.45□□□□□ -1.7
RPL39P62891 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC4.45□□□□□ -1.7
RPL39P62891 AC015977.1-201ENST00000418887 292 ntBASIC4.45□□□□□ -1.7
RPL39P62891 RTCA-AS1-201ENST00000421185 423 ntTSL 3 BASIC4.45□□□□□ -1.7
RPL39P62891 HNRNPA1P18-201ENST00000433537 927 ntBASIC4.45□□□□□ -1.7
RPL39P62891 AL390879.1-201ENST00000439143 386 ntBASIC4.45□□□□□ -1.7
RPL39P62891 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC4.45□□□□□ -1.7
RPL39P62891 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC4.45□□□□□ -1.7
RPL39P62891 AC126615.1-201ENST00000470084 630 ntBASIC4.45□□□□□ -1.7
RPL39P62891 AC018475.1-201ENST00000478358 465 ntBASIC4.45□□□□□ -1.7
RPL39P62891 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC4.45□□□□□ -1.7
RPL39P62891 RPL19P11-201ENST00000495944 589 ntBASIC4.45□□□□□ -1.7
RPL39P62891 GAPDHP38-201ENST00000503632 1002 ntBASIC4.45□□□□□ -1.7
RPL39P62891 SNORA81.2-201ENST00000516868 170 ntBASIC4.45□□□□□ -1.7
RPL39P62891 AC107952.1-201ENST00000524200 376 ntBASIC4.45□□□□□ -1.7
RPL39P62891 OR4C1P-201ENST00000530880 937 ntBASIC4.45□□□□□ -1.7
RPL39P62891 SETP17-201ENST00000534163 817 ntBASIC4.45□□□□□ -1.7
RPL39P62891 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC4.45□□□□□ -1.7
RPL39P62891 MYL2-203ENST00000548438 664 ntTSL 3 BASIC4.45□□□□□ -1.7
RPL39P62891 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RPL39P62891 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC4.45□□□□□ -1.7
RPL39P62891 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC4.45□□□□□ -1.7
RPL39P62891 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC4.45□□□□□ -1.7
RPL39P62891 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC4.45□□□□□ -1.7
RPL39P62891 AC018521.4-201ENST00000578239 531 ntTSL 4 BASIC4.45□□□□□ -1.7
RPL39P62891 MIR4262-201ENST00000578394 54 ntBASIC4.45□□□□□ -1.7
RPL39P62891 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC4.45□□□□□ -1.7
RPL39P62891 ACTG1P22-201ENST00000603793 1099 ntBASIC4.45□□□□□ -1.7
RPL39P62891 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC4.45□□□□□ -1.7
RPL39P62891 AC009237.12-201ENST00000604755 742 ntBASIC4.45□□□□□ -1.7
RPL39P62891 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC4.45□□□□□ -1.7
RPL39P62891 AC093635.1-201ENST00000609028 555 ntBASIC4.45□□□□□ -1.7
RPL39P62891 MRPL57P3-201ENST00000619218 176 ntBASIC4.45□□□□□ -1.7
RPL39P62891 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC4.45□□□□□ -1.7
RPL39P62891 AC013489.3-201ENST00000623274 517 ntBASIC4.45□□□□□ -1.7
RPL39P62891 AC061999.1-201ENST00000624454 177 ntBASIC4.45□□□□□ -1.7
RPL39P62891 AL035425.4-201ENST00000624509 1063 ntBASIC4.45□□□□□ -1.7
RPL39P62891 AC005858.3-201ENST00000624756 589 ntBASIC4.45□□□□□ -1.7
RPL39P62891 TEX41-255ENST00000626404 610 ntTSL 5 BASIC4.45□□□□□ -1.7
RPL39P62891 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC4.45□□□□□ -1.7
RPL39P62891 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC4.45□□□□□ -1.7
RPL39P62891 HBG1-202ENST00000632727 369 ntTSL 3 BASIC4.45□□□□□ -1.7
RPL39P62891 AC140479.4-205ENST00000636339 820 ntBASIC4.45□□□□□ -1.7
RPL39P62891 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC4.45□□□□□ -1.7
RPL39P62891 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
RPL39P62891 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
RPL39P62891 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RPL39P62891 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
RPL39P62891 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
RPL39P62891 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RPL39P62891 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC4.45□□□□□ -1.7
RPL39P62891 OR2A3P-202ENST00000641249 1776 ntBASIC4.45□□□□□ -1.7
RPL39P62891 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC4.45□□□□□ -1.7
RPL39P62891 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
RPL39P62891 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RPL39P62891 CCNT2P1-201ENST00000423082 1315 ntBASIC4.45□□□□□ -1.7
RPL39P62891 PSMC1P4-201ENST00000515236 1327 ntBASIC4.45□□□□□ -1.7
RPL39P62891 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
RPL39P62891 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RPL39P62891 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RPL39P62891 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
RPL39P62891 AP001541.1-201ENST00000623322 1904 ntBASIC4.44□□□□□ -1.7
RPL39P62891 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC4.44□□□□□ -1.7
RPL39P62891 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RPL39P62891 STK3-216ENST00000523601 3107 ntTSL 2 BASIC4.44□□□□□ -1.7
RPL39P62891 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
RPL39P62891 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RPL39P62891 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
RPL39P62891 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
RPL39P62891 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RPL39P62891 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
RPL39P62891 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RPL39P62891 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RPL39P62891 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms