Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
LHX1P48742 AC092821.2-201ENST00000545710 2042 ntBASIC6.88□□□□□ -1.31
LHX1P48742 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
LHX1P48742 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
LHX1P48742 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
LHX1P48742 AL359694.2-201ENST00000567753 1615 ntBASIC6.87□□□□□ -1.31
LHX1P48742 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.87□□□□□ -1.31
LHX1P48742 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
LHX1P48742 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
LHX1P48742 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC6.87□□□□□ -1.31
LHX1P48742 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
LHX1P48742 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.87□□□□□ -1.31
LHX1P48742 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
LHX1P48742 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.87□□□□□ -1.31
LHX1P48742 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
LHX1P48742 SNORD16-201ENST00000362803 99 ntBASIC6.87□□□□□ -1.31
LHX1P48742 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
LHX1P48742 AL050335.1-201ENST00000396909 869 ntBASIC6.87□□□□□ -1.31
LHX1P48742 AC003045.1-201ENST00000398779 713 ntBASIC6.87□□□□□ -1.31
LHX1P48742 RN7SKP86-201ENST00000410454 332 ntBASIC6.87□□□□□ -1.31
LHX1P48742 RN7SKP281-201ENST00000410472 352 ntBASIC6.87□□□□□ -1.31
LHX1P48742 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC6.87□□□□□ -1.31
LHX1P48742 AC002127.1-201ENST00000421305 225 ntBASIC6.87□□□□□ -1.31
LHX1P48742 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.87□□□□□ -1.31
LHX1P48742 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
LHX1P48742 H3F3AP5-201ENST00000475267 429 ntBASIC6.87□□□□□ -1.31
LHX1P48742 AC026254.2-201ENST00000475295 371 ntBASIC6.87□□□□□ -1.31
LHX1P48742 GM2AP2-201ENST00000491764 562 ntBASIC6.87□□□□□ -1.31
LHX1P48742 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.87□□□□□ -1.31
LHX1P48742 AP000662.1-201ENST00000530952 487 ntBASIC6.87□□□□□ -1.31
LHX1P48742 EEF1A1P17-201ENST00000547505 1275 ntBASIC6.87□□□□□ -1.31
LHX1P48742 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC6.87□□□□□ -1.31
LHX1P48742 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.87□□□□□ -1.31
LHX1P48742 AC090616.1-201ENST00000583895 447 ntBASIC6.87□□□□□ -1.31
LHX1P48742 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC6.87□□□□□ -1.31
LHX1P48742 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
LHX1P48742 MIR6811-201ENST00000620409 58 ntBASIC6.87□□□□□ -1.31
LHX1P48742 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
LHX1P48742 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
LHX1P48742 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
LHX1P48742 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC6.87□□□□□ -1.31
LHX1P48742 AL391262.1-201ENST00000556558 1992 ntBASIC6.87□□□□□ -1.31
LHX1P48742 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
LHX1P48742 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.87□□□□□ -1.31
LHX1P48742 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
LHX1P48742 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
LHX1P48742 ZNF812P-201ENST00000457674 1694 ntBASIC6.87□□□□□ -1.31
LHX1P48742 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC6.86□□□□□ -1.31
LHX1P48742 AC011455.2-201ENST00000599320 3336 ntBASIC6.86□□□□□ -1.31
LHX1P48742 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
LHX1P48742 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
LHX1P48742 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
LHX1P48742 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
LHX1P48742 MTND5P12-201ENST00000502851 1449 ntBASIC6.86□□□□□ -1.31
LHX1P48742 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
LHX1P48742 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
LHX1P48742 AC005332.9-201ENST00000620266 2921 ntBASIC6.86□□□□□ -1.31
LHX1P48742 AC092111.1-201ENST00000618256 3358 ntBASIC6.86□□□□□ -1.31
LHX1P48742 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
LHX1P48742 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
LHX1P48742 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
LHX1P48742 RN7SKP171-201ENST00000364417 303 ntBASIC6.86□□□□□ -1.31
LHX1P48742 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
LHX1P48742 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
LHX1P48742 RNA5SP198-201ENST00000410376 127 ntBASIC6.86□□□□□ -1.31
LHX1P48742 RNU2-18P-201ENST00000411224 162 ntBASIC6.86□□□□□ -1.31
LHX1P48742 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.86□□□□□ -1.31
LHX1P48742 AL157884.1-201ENST00000424561 454 ntBASIC6.86□□□□□ -1.31
LHX1P48742 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
LHX1P48742 AL139158.1-201ENST00000424719 340 ntBASIC6.86□□□□□ -1.31
LHX1P48742 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.86□□□□□ -1.31
LHX1P48742 VN1R20P-201ENST00000425215 966 ntBASIC6.86□□□□□ -1.31
LHX1P48742 AC099782.1-201ENST00000425889 474 ntBASIC6.86□□□□□ -1.31
LHX1P48742 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.86□□□□□ -1.31
LHX1P48742 EMC3-AS1-205ENST00000438698 534 ntBASIC6.86□□□□□ -1.31
LHX1P48742 PMS2P9-201ENST00000441237 515 ntBASIC6.86□□□□□ -1.31
LHX1P48742 MGAT2P1-201ENST00000449718 797 ntBASIC6.86□□□□□ -1.31
LHX1P48742 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.86□□□□□ -1.31
LHX1P48742 AC019084.1-201ENST00000457337 432 ntBASIC6.86□□□□□ -1.31
LHX1P48742 AC005017.1-201ENST00000482002 490 ntBASIC6.86□□□□□ -1.31
LHX1P48742 RN7SL741P-201ENST00000482473 289 ntBASIC6.86□□□□□ -1.31
LHX1P48742 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC6.86□□□□□ -1.31
LHX1P48742 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC6.86□□□□□ -1.31
LHX1P48742 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.86□□□□□ -1.31
LHX1P48742 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC6.86□□□□□ -1.31
LHX1P48742 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC6.86□□□□□ -1.31
LHX1P48742 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC6.86□□□□□ -1.31
LHX1P48742 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.86□□□□□ -1.31
LHX1P48742 TPRX1P1-201ENST00000557620 319 ntBASIC6.86□□□□□ -1.31
LHX1P48742 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC6.86□□□□□ -1.31
LHX1P48742 OR7A11P-201ENST00000597719 953 ntBASIC6.86□□□□□ -1.31
LHX1P48742 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.86□□□□□ -1.31
LHX1P48742 AC097467.4-201ENST00000605504 141 ntBASIC6.86□□□□□ -1.31
LHX1P48742 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
LHX1P48742 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
LHX1P48742 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.86□□□□□ -1.31
LHX1P48742 AL132640.3-201ENST00000630473 177 ntBASIC6.86□□□□□ -1.31
LHX1P48742 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC6.86□□□□□ -1.31
LHX1P48742 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
LHX1P48742 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms