Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AL139041.1-201ENST00000605480 610 ntBASIC7.35□□□□□ -1.23
CIITAP33076 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC7.35□□□□□ -1.23
CIITAP33076 AL121936.2-201ENST00000641935 662 ntBASIC7.35□□□□□ -1.23
CIITAP33076 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
CIITAP33076 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CIITAP33076 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CIITAP33076 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CIITAP33076 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC7.35□□□□□ -1.23
CIITAP33076 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC7.35□□□□□ -1.23
CIITAP33076 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC7.35□□□□□ -1.23
CIITAP33076 SELE-203ENST00000367775 3389 ntTSL 5 BASIC7.35□□□□□ -1.23
CIITAP33076 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
CIITAP33076 LINC01613-201ENST00000561476 2780 ntBASIC7.35□□□□□ -1.23
CIITAP33076 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
CIITAP33076 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC7.35□□□□□ -1.23
CIITAP33076 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CIITAP33076 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CIITAP33076 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CIITAP33076 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
CIITAP33076 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
CIITAP33076 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CIITAP33076 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC7.34□□□□□ -1.23
CIITAP33076 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC7.34□□□□□ -1.23
CIITAP33076 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CIITAP33076 AC016251.2-201ENST00000623393 3089 ntBASIC7.34□□□□□ -1.23
CIITAP33076 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CIITAP33076 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CIITAP33076 AC013488.1-201ENST00000526618 1838 ntBASIC7.34□□□□□ -1.23
CIITAP33076 RAD17P2-201ENST00000451754 1977 ntBASIC7.34□□□□□ -1.23
CIITAP33076 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CIITAP33076 AC121334.1-201ENST00000396414 802 ntBASIC7.34□□□□□ -1.23
CIITAP33076 RNA5SP198-201ENST00000410376 127 ntBASIC7.34□□□□□ -1.23
CIITAP33076 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC7.34□□□□□ -1.23
CIITAP33076 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC7.34□□□□□ -1.23
CIITAP33076 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC7.34□□□□□ -1.23
CIITAP33076 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC7.34□□□□□ -1.23
CIITAP33076 EIF4E2P2-201ENST00000492033 736 ntBASIC7.34□□□□□ -1.23
CIITAP33076 RN7SL568P-201ENST00000493069 298 ntBASIC7.34□□□□□ -1.23
CIITAP33076 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC7.34□□□□□ -1.23
CIITAP33076 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC7.34□□□□□ -1.23
CIITAP33076 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC7.34□□□□□ -1.23
CIITAP33076 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC7.34□□□□□ -1.23
CIITAP33076 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC7.34□□□□□ -1.23
CIITAP33076 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC7.34□□□□□ -1.23
CIITAP33076 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
CIITAP33076 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC7.34□□□□□ -1.23
CIITAP33076 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC7.34□□□□□ -1.23
CIITAP33076 AC011500.1-201ENST00000601963 469 ntBASIC7.34□□□□□ -1.23
CIITAP33076 AC090953.1-201ENST00000604305 1092 ntBASIC7.34□□□□□ -1.23
CIITAP33076 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CIITAP33076 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CIITAP33076 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC7.34□□□□□ -1.23
CIITAP33076 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
CIITAP33076 AC068733.2-201ENST00000605434 1418 ntBASIC7.34□□□□□ -1.23
CIITAP33076 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CIITAP33076 KCNMB3P1-202ENST00000493696 3389 ntBASIC7.34□□□□□ -1.23
CIITAP33076 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
CIITAP33076 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC7.34□□□□□ -1.24
CIITAP33076 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC7.34□□□□□ -1.24
CIITAP33076 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC7.33□□□□□ -1.24
CIITAP33076 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
CIITAP33076 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CIITAP33076 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC7.33□□□□□ -1.24
CIITAP33076 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CIITAP33076 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CIITAP33076 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CIITAP33076 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CIITAP33076 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
CIITAP33076 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC7.33□□□□□ -1.24
CIITAP33076 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CIITAP33076 ZNF812P-201ENST00000457674 1694 ntBASIC7.33□□□□□ -1.24
CIITAP33076 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CIITAP33076 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC7.33□□□□□ -1.24
CIITAP33076 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CIITAP33076 SNORD35A-201ENST00000363389 86 ntBASIC7.33□□□□□ -1.24
CIITAP33076 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC7.33□□□□□ -1.24
CIITAP33076 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
CIITAP33076 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CIITAP33076 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC7.33□□□□□ -1.24
CIITAP33076 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC7.33□□□□□ -1.24
CIITAP33076 GTF3AP6-201ENST00000432585 986 ntBASIC7.33□□□□□ -1.24
CIITAP33076 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC7.33□□□□□ -1.24
CIITAP33076 AC044810.1-201ENST00000480271 711 ntBASIC7.33□□□□□ -1.24
CIITAP33076 AL117692.1-201ENST00000494283 713 ntBASIC7.33□□□□□ -1.24
CIITAP33076 AK6-203ENST00000502819 743 ntTSL 5 BASIC7.33□□□□□ -1.24
CIITAP33076 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CIITAP33076 AC084337.1-201ENST00000524809 686 ntBASIC7.33□□□□□ -1.24
CIITAP33076 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC7.33□□□□□ -1.24
CIITAP33076 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC7.33□□□□□ -1.24
CIITAP33076 AC023968.1-201ENST00000560719 475 ntBASIC7.33□□□□□ -1.24
CIITAP33076 AC105036.1-201ENST00000566222 271 ntBASIC7.33□□□□□ -1.24
CIITAP33076 AC007066.2-202ENST00000566531 914 ntBASIC7.33□□□□□ -1.24
CIITAP33076 RN7SL475P-201ENST00000583379 298 ntBASIC7.33□□□□□ -1.24
CIITAP33076 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC7.33□□□□□ -1.24
CIITAP33076 AC073046.2-201ENST00000604756 527 ntBASIC7.33□□□□□ -1.24
CIITAP33076 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC7.33□□□□□ -1.24
CIITAP33076 MIR6889-201ENST00000613185 59 ntBASIC7.33□□□□□ -1.24
CIITAP33076 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
CIITAP33076 SAGE3P-201ENST00000619800 1635 ntBASIC7.33□□□□□ -1.24
CIITAP33076 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC7.33□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms