Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 GNAI1-205ENST00000457358 1633 ntTSL 2 BASIC8.29□□□□□ -1.08
VARSP26640 KIAA1257-205ENST00000515659 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
VARSP26640 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
VARSP26640 GOSR2-232ENST00000640051 3964 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
VARSP26640 FAM13C-215ENST00000614220 3388 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
VARSP26640 ZNF611-203ENST00000540744 4417 ntAPPRIS P1 TSL 4 BASIC8.28□□□□□ -1.08
VARSP26640 SMG7-202ENST00000367537 5970 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
VARSP26640 AC009690.2-201ENST00000570175 3148 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
VARSP26640 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
VARSP26640 Z97832.2-201ENST00000605896 4261 ntBASIC8.28□□□□□ -1.08
VARSP26640 AL359922.2-201ENST00000581788 3017 ntBASIC8.28□□□□□ -1.08
VARSP26640 PSG5-202ENST00000366175 1766 ntTSL 5 BASIC8.28□□□□□ -1.08
VARSP26640 OR4G1P-202ENST00000641173 1788 ntBASIC8.28□□□□□ -1.08
VARSP26640 NCEH1-206ENST00000543711 4062 ntTSL 2 BASIC8.28□□□□□ -1.08
VARSP26640 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC8.28□□□□□ -1.08
VARSP26640 AL359922.3-201ENST00000624779 1670 ntBASIC8.28□□□□□ -1.08
VARSP26640 RAD18-201ENST00000264926 5886 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
VARSP26640 MEMO1-203ENST00000404530 1482 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
VARSP26640 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
VARSP26640 DAZ4-203ENST00000382432 2405 ntTSL 5 BASIC8.28□□□□□ -1.08
VARSP26640 DAZ2-205ENST00000382433 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
VARSP26640 XIAP-202ENST00000371199 8591 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
VARSP26640 SORBS1-204ENST00000361941 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
VARSP26640 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
VARSP26640 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
VARSP26640 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC8.28□□□□□ -1.08
VARSP26640 Y_RNA.160-201ENST00000363677 92 ntBASIC8.28□□□□□ -1.08
VARSP26640 RNU6-353P-201ENST00000364266 108 ntBASIC8.28□□□□□ -1.08
VARSP26640 Y_RNA.326-201ENST00000365176 113 ntBASIC8.28□□□□□ -1.08
VARSP26640 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
VARSP26640 PTBP3-205ENST00000374257 7240 ntAPPRIS ALT1 TSL 2 BASIC8.28□□□□□ -1.08
VARSP26640 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
VARSP26640 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
VARSP26640 GLRX3P2-201ENST00000405027 1038 ntBASIC8.28□□□□□ -1.08
VARSP26640 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC8.28□□□□□ -1.08
VARSP26640 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC8.28□□□□□ -1.08
VARSP26640 AC090044.1-201ENST00000423193 497 ntTSL 2 BASIC8.28□□□□□ -1.08
VARSP26640 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC8.28□□□□□ -1.08
VARSP26640 ETF1P3-201ENST00000430422 1160 ntBASIC8.28□□□□□ -1.08
VARSP26640 MRLN-202ENST00000430431 495 ntAPPRIS P2 TSL 2 BASIC8.28□□□□□ -1.08
VARSP26640 TMEM127-203ENST00000435268 582 ntTSL 3 BASIC8.28□□□□□ -1.08
VARSP26640 SDHDP2-201ENST00000436937 465 ntBASIC8.28□□□□□ -1.08
VARSP26640 BMS1P10-201ENST00000443754 1120 ntBASIC8.28□□□□□ -1.08
VARSP26640 CYP4F25P-201ENST00000446871 520 ntBASIC8.28□□□□□ -1.08
VARSP26640 FAR2P3-205ENST00000447059 604 ntBASIC8.28□□□□□ -1.08
VARSP26640 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC8.28□□□□□ -1.08
VARSP26640 AC092634.4-203ENST00000451395 448 ntBASIC8.28□□□□□ -1.08
VARSP26640 PROX1-AS1-203ENST00000451396 476 ntTSL 5 BASIC8.28□□□□□ -1.08
VARSP26640 OR6C5P-201ENST00000452388 923 ntBASIC8.28□□□□□ -1.08
VARSP26640 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC8.28□□□□□ -1.08
VARSP26640 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC8.28□□□□□ -1.08
VARSP26640 LRRC34P2-201ENST00000514850 553 ntBASIC8.28□□□□□ -1.08
VARSP26640 AC020688.1-201ENST00000519282 1248 ntBASIC8.28□□□□□ -1.08
VARSP26640 ATP6V1G1P2-201ENST00000522436 346 ntBASIC8.28□□□□□ -1.08
VARSP26640 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC8.28□□□□□ -1.08
VARSP26640 AP000757.1-202ENST00000525260 891 ntTSL 3 BASIC8.28□□□□□ -1.08
VARSP26640 AP003072.1-201ENST00000531740 145 ntBASIC8.28□□□□□ -1.08
VARSP26640 TAS2R38-201ENST00000547270 1143 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
VARSP26640 AC116903.1-201ENST00000557683 539 ntTSL 4 BASIC8.28□□□□□ -1.08
VARSP26640 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC8.28□□□□□ -1.08
VARSP26640 AC012186.1-201ENST00000566702 398 ntBASIC8.28□□□□□ -1.08
VARSP26640 ARPP19-213ENST00000569723 550 ntTSL 4 BASIC8.28□□□□□ -1.08
VARSP26640 MRPL45P2-203ENST00000573318 473 ntBASIC8.28□□□□□ -1.08
VARSP26640 MIR3912-201ENST00000577566 105 ntBASIC8.28□□□□□ -1.08
VARSP26640 OR4K7P-201ENST00000580232 945 ntBASIC8.28□□□□□ -1.08
VARSP26640 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC8.28□□□□□ -1.08
VARSP26640 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC8.28□□□□□ -1.08
VARSP26640 RN7SL664P-201ENST00000584239 305 ntBASIC8.28□□□□□ -1.08
VARSP26640 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC8.28□□□□□ -1.08
VARSP26640 AC008277.2-201ENST00000605196 797 ntBASIC8.28□□□□□ -1.08
VARSP26640 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC8.28□□□□□ -1.08
VARSP26640 AC008536.2-201ENST00000607284 349 ntBASIC8.28□□□□□ -1.08
VARSP26640 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC8.28□□□□□ -1.08
VARSP26640 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
VARSP26640 Metazoa_SRP.71-201ENST00000612122 282 ntBASIC8.28□□□□□ -1.08
VARSP26640 AC010538.1-201ENST00000615131 663 ntBASIC8.28□□□□□ -1.08
VARSP26640 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC8.28□□□□□ -1.08
VARSP26640 AC079684.1-201ENST00000621405 437 ntBASIC8.28□□□□□ -1.08
VARSP26640 AL669830.1-201ENST00000621457 656 ntBASIC8.28□□□□□ -1.08
VARSP26640 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC8.28□□□□□ -1.08
VARSP26640 RBMS3-AS2-207ENST00000629416 456 ntTSL 5 BASIC8.28□□□□□ -1.08
VARSP26640 AL121594.6-201ENST00000633440 261 ntBASIC8.28□□□□□ -1.08
VARSP26640 AC114776.1-201ENST00000414159 4395 ntTSL 5 BASIC8.28□□□□□ -1.08
VARSP26640 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
VARSP26640 NUP155-201ENST00000231498 8143 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
VARSP26640 SYNE1-211ENST00000413186 4860 ntTSL 5 BASIC8.28□□□□□ -1.08
VARSP26640 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC8.28□□□□□ -1.08
VARSP26640 MIR137HG-205ENST00000634594 3586 ntTSL 5 BASIC8.28□□□□□ -1.08
VARSP26640 MASP1-202ENST00000296280 4015 ntAPPRIS P4 TSL 1 (best) BASIC8.28□□□□□ -1.08
VARSP26640 AC135731.2-201ENST00000603029 2098 ntBASIC8.28□□□□□ -1.08
VARSP26640 ZNF701-201ENST00000301093 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
VARSP26640 AC092111.2-201ENST00000611627 1414 ntBASIC8.28□□□□□ -1.08
VARSP26640 AC024132.1-201ENST00000382007 2509 ntTSL 2 BASIC8.28□□□□□ -1.08
VARSP26640 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
VARSP26640 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC8.28□□□□□ -1.08
VARSP26640 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
VARSP26640 DICER1-214ENST00000556045 2776 ntTSL 2 BASIC8.27□□□□□ -1.08
VARSP26640 AP4S1-211ENST00000616371 4595 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.08
VARSP26640 UTY-209ENST00000537580 6490 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
VARSP26640 ALKBH8-202ENST00000389568 2491 ntAPPRIS P3 TSL 5 BASIC8.27□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms