Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.86□□□□□ -1.47
FREM3P0C091 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.86□□□□□ -1.47
FREM3P0C091 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.86□□□□□ -1.47
FREM3P0C091 AC023310.2-201ENST00000553844 547 ntBASIC5.86□□□□□ -1.47
FREM3P0C091 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC5.86□□□□□ -1.47
FREM3P0C091 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.86□□□□□ -1.47
FREM3P0C091 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC5.86□□□□□ -1.47
FREM3P0C091 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.86□□□□□ -1.47
FREM3P0C091 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC5.86□□□□□ -1.47
FREM3P0C091 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
FREM3P0C091 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
FREM3P0C091 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
FREM3P0C091 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
FREM3P0C091 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.86□□□□□ -1.47
FREM3P0C091 BTK-209ENST00000618050 2417 ntTSL 5 BASIC5.86□□□□□ -1.47
FREM3P0C091 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
FREM3P0C091 AL353753.1-201ENST00000612217 2320 ntTSL 2 BASIC5.86□□□□□ -1.47
FREM3P0C091 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC5.86□□□□□ -1.47
FREM3P0C091 MIR1275-201ENST00000408770 80 ntBASIC5.86□□□□□ -1.47
FREM3P0C091 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
FREM3P0C091 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.86□□□□□ -1.47
FREM3P0C091 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.86□□□□□ -1.47
FREM3P0C091 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.86□□□□□ -1.47
FREM3P0C091 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC5.86□□□□□ -1.47
FREM3P0C091 AP004607.6-201ENST00000525033 1202 ntBASIC5.86□□□□□ -1.47
FREM3P0C091 KCTD9P4-201ENST00000526766 1166 ntBASIC5.86□□□□□ -1.47
FREM3P0C091 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.86□□□□□ -1.47
FREM3P0C091 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC5.86□□□□□ -1.47
FREM3P0C091 AL132796.3-201ENST00000624703 900 ntBASIC5.86□□□□□ -1.47
FREM3P0C091 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.86□□□□□ -1.47
FREM3P0C091 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
FREM3P0C091 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
FREM3P0C091 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
FREM3P0C091 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
FREM3P0C091 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC5.85□□□□□ -1.47
FREM3P0C091 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
FREM3P0C091 AC241584.2-201ENST00000637142 2090 ntBASIC5.85□□□□□ -1.47
FREM3P0C091 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.85□□□□□ -1.47
FREM3P0C091 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
FREM3P0C091 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
FREM3P0C091 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC5.85□□□□□ -1.47
FREM3P0C091 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
FREM3P0C091 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC5.85□□□□□ -1.47
FREM3P0C091 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
FREM3P0C091 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC5.85□□□□□ -1.47
FREM3P0C091 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
FREM3P0C091 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
FREM3P0C091 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC5.85□□□□□ -1.47
FREM3P0C091 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC5.85□□□□□ -1.47
FREM3P0C091 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC5.85□□□□□ -1.47
FREM3P0C091 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.85□□□□□ -1.47
FREM3P0C091 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.85□□□□□ -1.47
FREM3P0C091 AL663061.1-201ENST00000416625 580 ntBASIC5.85□□□□□ -1.47
FREM3P0C091 AC108479.1-201ENST00000431142 427 ntBASIC5.85□□□□□ -1.47
FREM3P0C091 MED28P4-201ENST00000433137 572 ntBASIC5.85□□□□□ -1.47
FREM3P0C091 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.85□□□□□ -1.47
FREM3P0C091 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.85□□□□□ -1.47
FREM3P0C091 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.85□□□□□ -1.47
FREM3P0C091 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC5.85□□□□□ -1.47
FREM3P0C091 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.85□□□□□ -1.47
FREM3P0C091 AC139272.1-201ENST00000505516 640 ntBASIC5.85□□□□□ -1.47
FREM3P0C091 AC131392.1-201ENST00000506490 633 ntBASIC5.85□□□□□ -1.47
FREM3P0C091 AC124891.1-201ENST00000536322 519 ntBASIC5.85□□□□□ -1.47
FREM3P0C091 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.85□□□□□ -1.47
FREM3P0C091 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC5.85□□□□□ -1.47
FREM3P0C091 AL162632.2-201ENST00000553933 399 ntBASIC5.85□□□□□ -1.47
FREM3P0C091 CYCSP1-201ENST00000604815 315 ntBASIC5.85□□□□□ -1.47
FREM3P0C091 AC097467.4-201ENST00000605504 141 ntBASIC5.85□□□□□ -1.47
FREM3P0C091 AL513218.1-201ENST00000606527 391 ntBASIC5.85□□□□□ -1.47
FREM3P0C091 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.85□□□□□ -1.47
FREM3P0C091 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
FREM3P0C091 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.85□□□□□ -1.47
FREM3P0C091 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
FREM3P0C091 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC5.85□□□□□ -1.47
FREM3P0C091 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC5.85□□□□□ -1.47
FREM3P0C091 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
FREM3P0C091 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
FREM3P0C091 AP002370.1-201ENST00000528055 1602 ntBASIC5.85□□□□□ -1.47
FREM3P0C091 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC5.85□□□□□ -1.47
FREM3P0C091 NACA-203ENST00000454682 6629 ntTSL 5 BASIC5.85□□□□□ -1.47
FREM3P0C091 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC5.85□□□□□ -1.47
FREM3P0C091 TMEM75-201ENST00000624314 2165 ntBASIC5.85□□□□□ -1.47
FREM3P0C091 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC5.85□□□□□ -1.47
FREM3P0C091 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
FREM3P0C091 RNA5SP346-201ENST00000363541 121 ntBASIC5.84□□□□□ -1.47
FREM3P0C091 RNA5SP279-201ENST00000365513 117 ntBASIC5.84□□□□□ -1.47
FREM3P0C091 RANP6-201ENST00000413691 644 ntBASIC5.84□□□□□ -1.47
FREM3P0C091 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.84□□□□□ -1.47
FREM3P0C091 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC5.84□□□□□ -1.47
FREM3P0C091 RN7SL568P-201ENST00000493069 298 ntBASIC5.84□□□□□ -1.47
FREM3P0C091 IGKV3D-25-201ENST00000519599 235 ntBASIC5.84□□□□□ -1.47
FREM3P0C091 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.84□□□□□ -1.47
FREM3P0C091 TOMM20P1-201ENST00000534518 427 ntBASIC5.84□□□□□ -1.47
FREM3P0C091 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC5.84□□□□□ -1.47
FREM3P0C091 AC090616.1-201ENST00000583895 447 ntBASIC5.84□□□□□ -1.47
FREM3P0C091 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.84□□□□□ -1.47
FREM3P0C091 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.84□□□□□ -1.47
FREM3P0C091 AC005393.1-201ENST00000617916 584 ntBASIC5.84□□□□□ -1.47
FREM3P0C091 AC012653.2-201ENST00000621880 420 ntBASIC5.84□□□□□ -1.47
FREM3P0C091 MIR6806-201ENST00000622141 64 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms