Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RETP07949 AL121949.2-201ENST00000403446 1548 ntBASIC6.75□□□□□ -1.33
RETP07949 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RETP07949 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
RETP07949 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC6.75□□□□□ -1.33
RETP07949 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RETP07949 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RETP07949 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RETP07949 AC129502.1-201ENST00000623261 1654 ntBASIC6.74□□□□□ -1.33
RETP07949 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RETP07949 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.74□□□□□ -1.33
RETP07949 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC6.74□□□□□ -1.33
RETP07949 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
RETP07949 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.74□□□□□ -1.33
RETP07949 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RETP07949 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
RETP07949 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
RETP07949 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.74□□□□□ -1.33
RETP07949 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RETP07949 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RETP07949 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.74□□□□□ -1.33
RETP07949 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
RETP07949 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RETP07949 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
RETP07949 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
RETP07949 NOX1-203ENST00000372964 661 ntTSL 2 BASIC6.74□□□□□ -1.33
RETP07949 AC004386.1-201ENST00000393214 761 ntBASIC6.74□□□□□ -1.33
RETP07949 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.74□□□□□ -1.33
RETP07949 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.74□□□□□ -1.33
RETP07949 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC6.74□□□□□ -1.33
RETP07949 GAPDHP57-201ENST00000424400 585 ntBASIC6.74□□□□□ -1.33
RETP07949 AL590128.1-201ENST00000433407 286 ntBASIC6.74□□□□□ -1.33
RETP07949 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
RETP07949 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC6.74□□□□□ -1.33
RETP07949 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC6.74□□□□□ -1.33
RETP07949 PRDX1P1-201ENST00000449329 596 ntBASIC6.74□□□□□ -1.33
RETP07949 AL451063.1-201ENST00000450164 1133 ntBASIC6.74□□□□□ -1.33
RETP07949 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.74□□□□□ -1.33
RETP07949 AC074386.1-201ENST00000476560 767 ntBASIC6.74□□□□□ -1.33
RETP07949 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC6.74□□□□□ -1.33
RETP07949 AC023818.1-201ENST00000498379 384 ntBASIC6.74□□□□□ -1.33
RETP07949 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.74□□□□□ -1.33
RETP07949 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC6.74□□□□□ -1.33
RETP07949 COX6B1P4-201ENST00000519826 484 ntBASIC6.74□□□□□ -1.33
RETP07949 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.74□□□□□ -1.33
RETP07949 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.74□□□□□ -1.33
RETP07949 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC6.74□□□□□ -1.33
RETP07949 AC067773.1-201ENST00000603284 1094 ntBASIC6.74□□□□□ -1.33
RETP07949 AC005899.7-201ENST00000618199 588 ntBASIC6.74□□□□□ -1.33
RETP07949 AL596275.2-208ENST00000641192 594 ntBASIC6.74□□□□□ -1.33
RETP07949 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RETP07949 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RETP07949 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RETP07949 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC6.74□□□□□ -1.33
RETP07949 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
RETP07949 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.74□□□□□ -1.33
RETP07949 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RETP07949 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
RETP07949 LARS-212ENST00000510191 3737 ntTSL 2 BASIC6.74□□□□□ -1.33
RETP07949 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
RETP07949 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
RETP07949 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC6.74□□□□□ -1.33
RETP07949 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RETP07949 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RETP07949 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
RETP07949 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC6.73□□□□□ -1.33
RETP07949 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RETP07949 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC6.73□□□□□ -1.33
RETP07949 AC137056.2-201ENST00000624055 1958 ntBASIC6.73□□□□□ -1.33
RETP07949 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RETP07949 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.73□□□□□ -1.33
RETP07949 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC6.73□□□□□ -1.33
RETP07949 ZNF402P-201ENST00000404435 3100 ntBASIC6.73□□□□□ -1.33
RETP07949 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC6.73□□□□□ -1.33
RETP07949 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.73□□□□□ -1.33
RETP07949 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC6.73□□□□□ -1.33
RETP07949 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RETP07949 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
RETP07949 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
RETP07949 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RETP07949 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC6.73□□□□□ -1.33
RETP07949 RN7SKP69-201ENST00000365390 305 ntBASIC6.73□□□□□ -1.33
RETP07949 RNU6-316P-201ENST00000391027 107 ntBASIC6.73□□□□□ -1.33
RETP07949 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.73□□□□□ -1.33
RETP07949 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RETP07949 IPPKP1-201ENST00000422501 768 ntBASIC6.73□□□□□ -1.33
RETP07949 PSMC1P2-201ENST00000423961 1204 ntBASIC6.73□□□□□ -1.33
RETP07949 AC104843.2-201ENST00000427666 297 ntBASIC6.73□□□□□ -1.33
RETP07949 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.73□□□□□ -1.33
RETP07949 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC6.73□□□□□ -1.33
RETP07949 OR51P1P-201ENST00000447547 942 ntBASIC6.73□□□□□ -1.33
RETP07949 OR9L1P-201ENST00000529493 933 ntBASIC6.73□□□□□ -1.33
RETP07949 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.73□□□□□ -1.33
RETP07949 NXPE2P1-201ENST00000543705 726 ntBASIC6.73□□□□□ -1.33
RETP07949 AC023827.2-201ENST00000566880 1061 ntBASIC6.73□□□□□ -1.33
RETP07949 NPM1P45-201ENST00000583151 559 ntBASIC6.73□□□□□ -1.33
RETP07949 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.73□□□□□ -1.33
RETP07949 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.73□□□□□ -1.33
RETP07949 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC6.73□□□□□ -1.33
RETP07949 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms