Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SCN11AQ9UI33 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
SCN11AQ9UI33 AC023490.2-201ENST00000359859 470 ntBASIC8.1□□□□□ -1.11
SCN11AQ9UI33 PPCS-201ENST00000372556 984 ntTSL 2 BASIC8.1□□□□□ -1.11
SCN11AQ9UI33 AL050335.1-201ENST00000396909 869 ntBASIC8.1□□□□□ -1.11
SCN11AQ9UI33 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC8.1□□□□□ -1.11
SCN11AQ9UI33 NDUFS5P5-201ENST00000437256 321 ntBASIC8.1□□□□□ -1.11
SCN11AQ9UI33 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC8.1□□□□□ -1.11
SCN11AQ9UI33 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC8.1□□□□□ -1.11
SCN11AQ9UI33 AL136981.1-203ENST00000451452 3844 ntBASIC8.1□□□□□ -1.11
SCN11AQ9UI33 RPS26P39-201ENST00000469206 341 ntBASIC8.1□□□□□ -1.11
SCN11AQ9UI33 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SCN11AQ9UI33 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC8.1□□□□□ -1.11
SCN11AQ9UI33 AC090958.1-201ENST00000511122 351 ntBASIC8.1□□□□□ -1.11
SCN11AQ9UI33 AC021269.1-201ENST00000526860 705 ntBASIC8.1□□□□□ -1.11
SCN11AQ9UI33 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC8.1□□□□□ -1.11
SCN11AQ9UI33 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC8.1□□□□□ -1.11
SCN11AQ9UI33 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC8.1□□□□□ -1.11
SCN11AQ9UI33 OTX2-203ENST00000554559 715 ntTSL 5 BASIC8.1□□□□□ -1.11
SCN11AQ9UI33 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC8.1□□□□□ -1.11
SCN11AQ9UI33 AC092121.1-201ENST00000569452 202 ntBASIC8.1□□□□□ -1.11
SCN11AQ9UI33 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC8.1□□□□□ -1.11
SCN11AQ9UI33 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC8.1□□□□□ -1.11
SCN11AQ9UI33 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SCN11AQ9UI33 AC108673.3-201ENST00000609183 335 ntBASIC8.1□□□□□ -1.11
SCN11AQ9UI33 AC109309.2-201ENST00000612597 332 ntBASIC8.1□□□□□ -1.11
SCN11AQ9UI33 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC8.1□□□□□ -1.11
SCN11AQ9UI33 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SCN11AQ9UI33 AL137067.2-201ENST00000621202 131 ntBASIC8.1□□□□□ -1.11
SCN11AQ9UI33 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SCN11AQ9UI33 MYO10-201ENST00000274203 11456 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
SCN11AQ9UI33 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC8.1□□□□□ -1.11
SCN11AQ9UI33 MTF1-201ENST00000373036 7972 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SCN11AQ9UI33 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC8.1□□□□□ -1.11
SCN11AQ9UI33 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SCN11AQ9UI33 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SCN11AQ9UI33 OR13C1P-202ENST00000641378 2919 ntBASIC8.1□□□□□ -1.11
SCN11AQ9UI33 AC084782.1-201ENST00000564401 2465 ntBASIC8.1□□□□□ -1.11
SCN11AQ9UI33 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SCN11AQ9UI33 MTCO1P11-201ENST00000429111 1528 ntBASIC8.1□□□□□ -1.11
SCN11AQ9UI33 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC8.1□□□□□ -1.11
SCN11AQ9UI33 OR52B3P-201ENST00000314715 928 ntBASIC8.1□□□□□ -1.11
SCN11AQ9UI33 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SCN11AQ9UI33 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
SCN11AQ9UI33 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SCN11AQ9UI33 AL451046.1-201ENST00000406097 534 ntBASIC8.1□□□□□ -1.11
SCN11AQ9UI33 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC8.1□□□□□ -1.11
SCN11AQ9UI33 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC8.1□□□□□ -1.11
SCN11AQ9UI33 KRTAP2-5P-201ENST00000446109 396 ntBASIC8.1□□□□□ -1.11
SCN11AQ9UI33 VN1R38P-201ENST00000450265 887 ntBASIC8.1□□□□□ -1.11
SCN11AQ9UI33 AL158068.1-201ENST00000506116 616 ntBASIC8.1□□□□□ -1.11
SCN11AQ9UI33 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC8.1□□□□□ -1.11
SCN11AQ9UI33 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC8.1□□□□□ -1.11
SCN11AQ9UI33 AC007956.1-201ENST00000555623 542 ntBASIC8.1□□□□□ -1.11
SCN11AQ9UI33 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC8.1□□□□□ -1.11
SCN11AQ9UI33 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC8.1□□□□□ -1.11
SCN11AQ9UI33 AC103703.1-201ENST00000634783 663 ntBASIC8.1□□□□□ -1.11
SCN11AQ9UI33 5S_rRNA.28-201ENST00000638107 119 ntBASIC8.1□□□□□ -1.11
SCN11AQ9UI33 F5-202ENST00000367797 7024 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
SCN11AQ9UI33 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SCN11AQ9UI33 PHIP-201ENST00000275034 10460 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
SCN11AQ9UI33 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
SCN11AQ9UI33 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC8.09□□□□□ -1.11
SCN11AQ9UI33 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SCN11AQ9UI33 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
SCN11AQ9UI33 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
SCN11AQ9UI33 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
SCN11AQ9UI33 ARNT2-207ENST00000533983 6690 ntAPPRIS ALT1 TSL 5 BASIC8.09□□□□□ -1.11
SCN11AQ9UI33 RAD18-201ENST00000264926 5886 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
SCN11AQ9UI33 DGKK-201ENST00000611977 7407 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
SCN11AQ9UI33 AP003486.1-201ENST00000525716 3994 ntBASIC8.09□□□□□ -1.11
SCN11AQ9UI33 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SCN11AQ9UI33 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
SCN11AQ9UI33 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC8.09□□□□□ -1.11
SCN11AQ9UI33 MFSD8-218ENST00000641186 4448 ntBASIC8.09□□□□□ -1.11
SCN11AQ9UI33 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
SCN11AQ9UI33 SNORA51.1-201ENST00000363243 140 ntBASIC8.09□□□□□ -1.11
SCN11AQ9UI33 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
SCN11AQ9UI33 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC8.09□□□□□ -1.11
SCN11AQ9UI33 BMS1P13-201ENST00000417301 885 ntBASIC8.09□□□□□ -1.11
SCN11AQ9UI33 PCBP2P1-201ENST00000437262 977 ntBASIC8.09□□□□□ -1.11
SCN11AQ9UI33 BMS1P10-201ENST00000443754 1120 ntBASIC8.09□□□□□ -1.11
SCN11AQ9UI33 CFL1P4-201ENST00000451536 498 ntBASIC8.09□□□□□ -1.11
SCN11AQ9UI33 GEMIN2P1-201ENST00000454246 752 ntBASIC8.09□□□□□ -1.11
SCN11AQ9UI33 CETN3-206ENST00000522864 738 ntTSL 3 BASIC8.09□□□□□ -1.11
SCN11AQ9UI33 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
SCN11AQ9UI33 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC8.09□□□□□ -1.11
SCN11AQ9UI33 IKZF3-203ENST00000346872 9667 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
SCN11AQ9UI33 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
SCN11AQ9UI33 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
SCN11AQ9UI33 CREM-217ENST00000439705 2306 ntTSL 5 BASIC8.09□□□□□ -1.11
SCN11AQ9UI33 ATF7-202ENST00000456903 5218 ntAPPRIS P2 TSL 5 BASIC8.09□□□□□ -1.12
SCN11AQ9UI33 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC8.09□□□□□ -1.12
SCN11AQ9UI33 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.12
SCN11AQ9UI33 DIO2-202ENST00000438257 6136 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SCN11AQ9UI33 KIAA1671-206ENST00000637069 6510 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
SCN11AQ9UI33 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
SCN11AQ9UI33 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC8.08□□□□□ -1.12
SCN11AQ9UI33 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
SCN11AQ9UI33 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms