Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 RBBP4P4-201ENST00000398588 1289 ntBASIC4.26□□□□□ -1.73
ALMS1Q8TCU4 EEF1B2P6-201ENST00000445713 673 ntBASIC4.26□□□□□ -1.73
ALMS1Q8TCU4 AC005532.2-201ENST00000467154 373 ntBASIC4.26□□□□□ -1.73
ALMS1Q8TCU4 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.26□□□□□ -1.73
ALMS1Q8TCU4 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC4.26□□□□□ -1.73
ALMS1Q8TCU4 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
ALMS1Q8TCU4 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.26□□□□□ -1.73
ALMS1Q8TCU4 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ALMS1Q8TCU4 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
ALMS1Q8TCU4 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC4.26□□□□□ -1.73
ALMS1Q8TCU4 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ALMS1Q8TCU4 AC022325.1-201ENST00000502748 2199 ntBASIC4.26□□□□□ -1.73
ALMS1Q8TCU4 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ALMS1Q8TCU4 KIF1B-211ENST00000620295 8624 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ALMS1Q8TCU4 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ALMS1Q8TCU4 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC4.26□□□□□ -1.73
ALMS1Q8TCU4 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ALMS1Q8TCU4 ZNF791-202ENST00000446165 6412 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ALMS1Q8TCU4 MYO10-201ENST00000274203 11456 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
ALMS1Q8TCU4 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC4.26□□□□□ -1.73
ALMS1Q8TCU4 AC093166.4-201ENST00000457867 318 ntBASIC4.26□□□□□ -1.73
ALMS1Q8TCU4 RPS23P1-201ENST00000491662 432 ntBASIC4.26□□□□□ -1.73
ALMS1Q8TCU4 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC4.26□□□□□ -1.73
ALMS1Q8TCU4 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC4.26□□□□□ -1.73
ALMS1Q8TCU4 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC4.26□□□□□ -1.73
ALMS1Q8TCU4 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ALMS1Q8TCU4 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ALMS1Q8TCU4 AL157899.1-201ENST00000604110 936 ntBASIC4.26□□□□□ -1.73
ALMS1Q8TCU4 Mico1.1-201ENST00000611698 204 ntBASIC4.26□□□□□ -1.73
ALMS1Q8TCU4 AC122713.2-201ENST00000624942 3335 ntBASIC4.26□□□□□ -1.73
ALMS1Q8TCU4 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ALMS1Q8TCU4 PHIP-201ENST00000275034 10460 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ALMS1Q8TCU4 CHD3-202ENST00000358181 7286 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
ALMS1Q8TCU4 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC4.26□□□□□ -1.73
ALMS1Q8TCU4 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC4.26□□□□□ -1.73
ALMS1Q8TCU4 MYH4-201ENST00000255381 6016 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ALMS1Q8TCU4 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ALMS1Q8TCU4 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
ALMS1Q8TCU4 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ALMS1Q8TCU4 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 RNA5SP46-201ENST00000362370 120 ntBASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 SNORA64.1-201ENST00000362600 132 ntBASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 RN7SKP103-201ENST00000363848 320 ntBASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 SNORA74A-201ENST00000364089 198 ntBASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 HMGB1P32-201ENST00000425971 565 ntBASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 EEF1B2P5-201ENST00000444820 548 ntBASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 RPS23P6-201ENST00000466136 431 ntBASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 PFN1P6-201ENST00000476786 399 ntBASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 ST3GAL1-201ENST00000399640 6764 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 CCDC150-201ENST00000389175 3685 ntAPPRIS P2 TSL 5 BASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 RPL7L1-208ENST00000493763 4476 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 ADGRE2-201ENST00000315576 6767 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 TATDN2P3-201ENST00000452855 3665 ntBASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 AMPD3-204ENST00000444303 3994 ntTSL 2 BASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 PRKG1-204ENST00000373985 6487 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 MYO5A-213ENST00000613858 12139 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 CECR2-206ENST00000612582 9645 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 DNAH9-203ENST00000454412 13452 ntTSL 5 BASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 TANC2-201ENST00000389520 6404 ntTSL 5 BASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 SUMO2P15-201ENST00000604285 278 ntBASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 AL136131.3-201ENST00000607600 188 ntBASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 OR8D2-201ENST00000624618 1051 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 PTPRT-204ENST00000373190 12559 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 ERG-204ENST00000398907 4809 ntTSL 5 BASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 WDR87-201ENST00000303868 8847 ntAPPRIS P3 TSL 2 BASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 AC117409.1-201ENST00000470499 1310 ntBASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 CUBNP3-201ENST00000457461 1784 ntBASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 SEC22B-201ENST00000578049 6922 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 LRP1-201ENST00000243077 14897 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 SELENOWP1-201ENST00000322792 252 ntBASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 CDK7P1-201ENST00000434574 693 ntBASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 AC093270.2-201ENST00000486157 792 ntBASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 CASP5-209ENST00000531367 879 ntTSL 5 BASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 AC008055.1-201ENST00000547032 609 ntBASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 BTBD3-215ENST00000618918 4486 ntAPPRIS ALT1 TSL 4 BASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 MARF1-202ENST00000540441 7105 ntTSL 5 BASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 MYH2-201ENST00000245503 6339 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 EEF1A1P14-201ENST00000421195 1376 ntBASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 AC112243.1-201ENST00000623949 3851 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 148.2 ms