Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
CCDC27Q2M243 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CCDC27Q2M243 RPL24P4-201ENST00000326586 421 ntBASIC9.01□□□□□ -0.97
CCDC27Q2M243 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CCDC27Q2M243 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
CCDC27Q2M243 SNORA70.3-201ENST00000365075 132 ntBASIC9.01□□□□□ -0.97
CCDC27Q2M243 MIR138-2-201ENST00000384916 84 ntBASIC9.01□□□□□ -0.97
CCDC27Q2M243 MIR27A-201ENST00000385073 78 ntBASIC9.01□□□□□ -0.97
CCDC27Q2M243 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
CCDC27Q2M243 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
CCDC27Q2M243 AL451061.1-201ENST00000407887 862 ntBASIC9.01□□□□□ -0.97
CCDC27Q2M243 RN7SKP91-201ENST00000410852 288 ntBASIC9.01□□□□□ -0.97
CCDC27Q2M243 RPSAP60-201ENST00000415403 880 ntBASIC9.01□□□□□ -0.97
CCDC27Q2M243 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
CCDC27Q2M243 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC9.01□□□□□ -0.97
CCDC27Q2M243 AL845321.1-201ENST00000444603 348 ntBASIC9.01□□□□□ -0.97
CCDC27Q2M243 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC9.01□□□□□ -0.97
CCDC27Q2M243 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC9.01□□□□□ -0.97
CCDC27Q2M243 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC9.01□□□□□ -0.97
CCDC27Q2M243 RBMY3AP-201ENST00000449381 1145 ntBASIC9.01□□□□□ -0.97
CCDC27Q2M243 ST13P21-201ENST00000453250 1098 ntBASIC9.01□□□□□ -0.97
CCDC27Q2M243 MEF2AP1-201ENST00000454867 863 ntBASIC9.01□□□□□ -0.97
CCDC27Q2M243 NPM1P29-201ENST00000483112 803 ntBASIC9.01□□□□□ -0.97
CCDC27Q2M243 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC9.01□□□□□ -0.97
CCDC27Q2M243 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
CCDC27Q2M243 AP001372.4-201ENST00000524889 472 ntBASIC9.01□□□□□ -0.97
CCDC27Q2M243 GTF2IP11-201ENST00000526931 420 ntBASIC9.01□□□□□ -0.97
CCDC27Q2M243 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC9.01□□□□□ -0.97
CCDC27Q2M243 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
CCDC27Q2M243 DPPA3P2-202ENST00000557188 1219 ntBASIC9.01□□□□□ -0.97
CCDC27Q2M243 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC9.01□□□□□ -0.97
CCDC27Q2M243 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC9.01□□□□□ -0.97
CCDC27Q2M243 AC073342.3-201ENST00000624211 193 ntBASIC9.01□□□□□ -0.97
CCDC27Q2M243 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC9.01□□□□□ -0.97
CCDC27Q2M243 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC9.01□□□□□ -0.97
CCDC27Q2M243 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC9.01□□□□□ -0.97
CCDC27Q2M243 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CCDC27Q2M243 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
CCDC27Q2M243 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
CCDC27Q2M243 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC9.01□□□□□ -0.97
CCDC27Q2M243 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC9.01□□□□□ -0.97
CCDC27Q2M243 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
CCDC27Q2M243 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CCDC27Q2M243 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CCDC27Q2M243 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC9□□□□□ -0.97
CCDC27Q2M243 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
CCDC27Q2M243 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC9□□□□□ -0.97
CCDC27Q2M243 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC9□□□□□ -0.97
CCDC27Q2M243 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CCDC27Q2M243 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CCDC27Q2M243 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
CCDC27Q2M243 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
CCDC27Q2M243 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CCDC27Q2M243 RNA5SP176-201ENST00000390956 110 ntBASIC9□□□□□ -0.97
CCDC27Q2M243 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC9□□□□□ -0.97
CCDC27Q2M243 LDHAP5-201ENST00000394996 622 ntBASIC9□□□□□ -0.97
CCDC27Q2M243 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
CCDC27Q2M243 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
CCDC27Q2M243 MRPL32P1-201ENST00000406301 247 ntBASIC9□□□□□ -0.97
CCDC27Q2M243 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC9□□□□□ -0.97
CCDC27Q2M243 PUDPP2-201ENST00000431423 643 ntBASIC9□□□□□ -0.97
CCDC27Q2M243 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC9□□□□□ -0.97
CCDC27Q2M243 CHCHD4P5-201ENST00000436684 427 ntBASIC9□□□□□ -0.97
CCDC27Q2M243 RPL32P14-201ENST00000463196 378 ntBASIC9□□□□□ -0.97
CCDC27Q2M243 RPL12P24-201ENST00000474907 486 ntBASIC9□□□□□ -0.97
CCDC27Q2M243 RN7SL205P-201ENST00000490174 284 ntBASIC9□□□□□ -0.97
CCDC27Q2M243 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC9□□□□□ -0.97
CCDC27Q2M243 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC9□□□□□ -0.97
CCDC27Q2M243 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC9□□□□□ -0.97
CCDC27Q2M243 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC9□□□□□ -0.97
CCDC27Q2M243 AC104115.2-201ENST00000523026 687 ntBASIC9□□□□□ -0.97
CCDC27Q2M243 RBMS2P1-201ENST00000525031 1226 ntBASIC9□□□□□ -0.97
CCDC27Q2M243 CASP1P2-201ENST00000526830 1258 ntBASIC9□□□□□ -0.97
CCDC27Q2M243 MTND1P24-201ENST00000552175 861 ntBASIC9□□□□□ -0.97
CCDC27Q2M243 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC9□□□□□ -0.97
CCDC27Q2M243 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC9□□□□□ -0.97
CCDC27Q2M243 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC9□□□□□ -0.97
CCDC27Q2M243 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC9□□□□□ -0.97
CCDC27Q2M243 DIMT1P1-201ENST00000603970 763 ntBASIC9□□□□□ -0.97
CCDC27Q2M243 AC013244.3-201ENST00000605614 388 ntBASIC9□□□□□ -0.97
CCDC27Q2M243 AC091768.1-201ENST00000609258 930 ntBASIC9□□□□□ -0.97
CCDC27Q2M243 AC008759.3-201ENST00000613300 508 ntBASIC9□□□□□ -0.97
CCDC27Q2M243 Six3os1_1.1-201ENST00000620900 87 ntBASIC9□□□□□ -0.97
CCDC27Q2M243 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC9□□□□□ -0.97
CCDC27Q2M243 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC9□□□□□ -0.97
CCDC27Q2M243 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC9□□□□□ -0.97
CCDC27Q2M243 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CCDC27Q2M243 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC9□□□□□ -0.97
CCDC27Q2M243 Z83820.1-201ENST00000456978 1499 ntBASIC9□□□□□ -0.97
CCDC27Q2M243 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
CCDC27Q2M243 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CCDC27Q2M243 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC9□□□□□ -0.97
CCDC27Q2M243 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
CCDC27Q2M243 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
CCDC27Q2M243 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC9□□□□□ -0.97
CCDC27Q2M243 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC9□□□□□ -0.97
CCDC27Q2M243 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CCDC27Q2M243 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC9□□□□□ -0.97
CCDC27Q2M243 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC9□□□□□ -0.97
CCDC27Q2M243 Z97989.1-201ENST00000531702 2421 ntBASIC9□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms