Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LMO4P61968 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC5.36□□□□□ -1.55
LMO4P61968 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC5.36□□□□□ -1.55
LMO4P61968 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC5.36□□□□□ -1.55
LMO4P61968 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LMO4P61968 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
LMO4P61968 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC5.36□□□□□ -1.55
LMO4P61968 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
LMO4P61968 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
LMO4P61968 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC5.36□□□□□ -1.55
LMO4P61968 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LMO4P61968 AL139384.2-201ENST00000613809 3590 ntBASIC5.36□□□□□ -1.55
LMO4P61968 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.36□□□□□ -1.55
LMO4P61968 OR7E156P-201ENST00000400303 464 ntBASIC5.36□□□□□ -1.55
LMO4P61968 GCNT1P4-201ENST00000404096 329 ntBASIC5.36□□□□□ -1.55
LMO4P61968 MIR1282-201ENST00000408865 101 ntBASIC5.36□□□□□ -1.55
LMO4P61968 RN7SKP281-201ENST00000410472 352 ntBASIC5.36□□□□□ -1.55
LMO4P61968 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.36□□□□□ -1.55
LMO4P61968 AC092865.3-201ENST00000425390 1026 ntBASIC5.36□□□□□ -1.55
LMO4P61968 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.36□□□□□ -1.55
LMO4P61968 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.36□□□□□ -1.55
LMO4P61968 AC003989.1-201ENST00000434569 565 ntBASIC5.36□□□□□ -1.55
LMO4P61968 EMC3-AS1-205ENST00000438698 534 ntBASIC5.36□□□□□ -1.55
LMO4P61968 RPL5P7-201ENST00000444235 813 ntBASIC5.36□□□□□ -1.55
LMO4P61968 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LMO4P61968 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.36□□□□□ -1.55
LMO4P61968 AC022415.1-202ENST00000486612 523 ntBASIC5.36□□□□□ -1.55
LMO4P61968 AC108103.1-201ENST00000511286 446 ntBASIC5.36□□□□□ -1.55
LMO4P61968 NPIPB14P-203ENST00000532298 987 ntBASIC5.36□□□□□ -1.55
LMO4P61968 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.36□□□□□ -1.55
LMO4P61968 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.36□□□□□ -1.55
LMO4P61968 TPRX1P1-201ENST00000557620 319 ntBASIC5.36□□□□□ -1.55
LMO4P61968 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
LMO4P61968 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC5.36□□□□□ -1.55
LMO4P61968 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LMO4P61968 MIR4310-201ENST00000582950 57 ntBASIC5.36□□□□□ -1.55
LMO4P61968 RN7SL475P-201ENST00000583379 298 ntBASIC5.36□□□□□ -1.55
LMO4P61968 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC5.36□□□□□ -1.55
LMO4P61968 AC124916.2-201ENST00000604416 224 ntBASIC5.36□□□□□ -1.55
LMO4P61968 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC5.36□□□□□ -1.55
LMO4P61968 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.36□□□□□ -1.55
LMO4P61968 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
LMO4P61968 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LMO4P61968 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LMO4P61968 SYT14P1-202ENST00000600441 1448 ntBASIC5.36□□□□□ -1.55
LMO4P61968 AL353743.3-201ENST00000442109 1468 ntBASIC5.36□□□□□ -1.55
LMO4P61968 CASC19-228ENST00000641414 1684 ntBASIC5.36□□□□□ -1.55
LMO4P61968 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC5.36□□□□□ -1.55
LMO4P61968 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC5.36□□□□□ -1.55
LMO4P61968 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LMO4P61968 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
LMO4P61968 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
LMO4P61968 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
LMO4P61968 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LMO4P61968 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
LMO4P61968 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LMO4P61968 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
LMO4P61968 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC5.35□□□□□ -1.55
LMO4P61968 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC5.35□□□□□ -1.55
LMO4P61968 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.35□□□□□ -1.55
LMO4P61968 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LMO4P61968 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.35□□□□□ -1.55
LMO4P61968 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.35□□□□□ -1.55
LMO4P61968 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LMO4P61968 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LMO4P61968 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.35□□□□□ -1.55
LMO4P61968 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LMO4P61968 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LMO4P61968 RNU1-46P-201ENST00000384425 164 ntBASIC5.35□□□□□ -1.55
LMO4P61968 AL157702.1-201ENST00000398764 426 ntBASIC5.35□□□□□ -1.55
LMO4P61968 SMC4P1-201ENST00000414479 527 ntBASIC5.35□□□□□ -1.55
LMO4P61968 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.35□□□□□ -1.55
LMO4P61968 RPSAP65-201ENST00000429660 595 ntBASIC5.35□□□□□ -1.55
LMO4P61968 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.35□□□□□ -1.55
LMO4P61968 RPL12P11-201ENST00000439970 501 ntBASIC5.35□□□□□ -1.55
LMO4P61968 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.35□□□□□ -1.55
LMO4P61968 AL136455.1-201ENST00000441083 1240 ntBASIC5.35□□□□□ -1.55
LMO4P61968 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC5.35□□□□□ -1.55
LMO4P61968 RBMY3AP-201ENST00000449381 1145 ntBASIC5.35□□□□□ -1.55
LMO4P61968 HMGB1P7-201ENST00000450921 612 ntBASIC5.35□□□□□ -1.55
LMO4P61968 RN7SL254P-201ENST00000460609 284 ntBASIC5.35□□□□□ -1.55
LMO4P61968 AP002884.1-201ENST00000479691 655 ntBASIC5.35□□□□□ -1.55
LMO4P61968 CREM-242ENST00000490511 469 ntTSL 2 BASIC5.35□□□□□ -1.55
LMO4P61968 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
LMO4P61968 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.35□□□□□ -1.55
LMO4P61968 IGHV3-57-201ENST00000520143 280 ntBASIC5.35□□□□□ -1.55
LMO4P61968 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
LMO4P61968 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.35□□□□□ -1.55
LMO4P61968 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC5.35□□□□□ -1.55
LMO4P61968 AC002310.3-201ENST00000569728 723 ntBASIC5.35□□□□□ -1.55
LMO4P61968 MTATP6P25-201ENST00000574491 261 ntBASIC5.35□□□□□ -1.55
LMO4P61968 DYNLL1P1-201ENST00000595442 269 ntBASIC5.35□□□□□ -1.55
LMO4P61968 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC5.35□□□□□ -1.55
LMO4P61968 AC006213.5-201ENST00000619673 288 ntBASIC5.35□□□□□ -1.55
LMO4P61968 MIR8089-201ENST00000620165 82 ntBASIC5.35□□□□□ -1.55
LMO4P61968 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.35□□□□□ -1.55
LMO4P61968 AC009950.2-201ENST00000636548 183 ntBASIC5.35□□□□□ -1.55
LMO4P61968 AL357140.4-201ENST00000636827 412 ntBASIC5.35□□□□□ -1.55
LMO4P61968 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC5.35□□□□□ -1.55
LMO4P61968 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms