Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
CTNNA1P35221 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CTNNA1P35221 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CTNNA1P35221 RN7SKP30-201ENST00000411373 334 ntBASIC6.9□□□□□ -1.3
CTNNA1P35221 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.9□□□□□ -1.3
CTNNA1P35221 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC6.9□□□□□ -1.3
CTNNA1P35221 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC6.9□□□□□ -1.3
CTNNA1P35221 CCNJP2-201ENST00000457810 1163 ntBASIC6.9□□□□□ -1.3
CTNNA1P35221 OR2A3P-201ENST00000493774 953 ntBASIC6.9□□□□□ -1.3
CTNNA1P35221 AC010409.2-201ENST00000505780 478 ntBASIC6.9□□□□□ -1.3
CTNNA1P35221 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC6.9□□□□□ -1.3
CTNNA1P35221 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC6.9□□□□□ -1.3
CTNNA1P35221 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.9□□□□□ -1.3
CTNNA1P35221 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.9□□□□□ -1.3
CTNNA1P35221 AL049840.5-201ENST00000602827 552 ntBASIC6.9□□□□□ -1.3
CTNNA1P35221 AL137246.1-201ENST00000607072 977 ntBASIC6.9□□□□□ -1.3
CTNNA1P35221 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC6.9□□□□□ -1.3
CTNNA1P35221 MIR6726-201ENST00000613751 61 ntBASIC6.9□□□□□ -1.3
CTNNA1P35221 MRPL57P3-201ENST00000619218 176 ntBASIC6.9□□□□□ -1.3
CTNNA1P35221 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.9□□□□□ -1.3
CTNNA1P35221 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC6.9□□□□□ -1.3
CTNNA1P35221 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.9□□□□□ -1.3
CTNNA1P35221 IMMTP1-201ENST00000435590 2219 ntBASIC6.9□□□□□ -1.3
CTNNA1P35221 AC005225.5-201ENST00000623547 2225 ntBASIC6.9□□□□□ -1.3
CTNNA1P35221 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
CTNNA1P35221 AC007159.1-201ENST00000566529 4706 ntBASIC6.9□□□□□ -1.31
CTNNA1P35221 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
CTNNA1P35221 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
CTNNA1P35221 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.9□□□□□ -1.31
CTNNA1P35221 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
CTNNA1P35221 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
CTNNA1P35221 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CTNNA1P35221 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
CTNNA1P35221 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
CTNNA1P35221 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
CTNNA1P35221 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CTNNA1P35221 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CTNNA1P35221 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.89□□□□□ -1.31
CTNNA1P35221 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.89□□□□□ -1.31
CTNNA1P35221 AC009362.1-201ENST00000427253 406 ntBASIC6.89□□□□□ -1.31
CTNNA1P35221 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC6.89□□□□□ -1.31
CTNNA1P35221 SLC25A24P1-202ENST00000434803 1220 ntBASIC6.89□□□□□ -1.31
CTNNA1P35221 H3F3BP1-201ENST00000440551 403 ntBASIC6.89□□□□□ -1.31
CTNNA1P35221 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC6.89□□□□□ -1.31
CTNNA1P35221 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC6.89□□□□□ -1.31
CTNNA1P35221 AC236972.4-201ENST00000458091 963 ntBASIC6.89□□□□□ -1.31
CTNNA1P35221 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.89□□□□□ -1.31
CTNNA1P35221 USP9YP2-201ENST00000504503 1000 ntBASIC6.89□□□□□ -1.31
CTNNA1P35221 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC6.89□□□□□ -1.31
CTNNA1P35221 USP9YP1-201ENST00000513521 1002 ntBASIC6.89□□□□□ -1.31
CTNNA1P35221 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.89□□□□□ -1.31
CTNNA1P35221 AC010442.1-201ENST00000515583 816 ntBASIC6.89□□□□□ -1.31
CTNNA1P35221 AC022973.2-201ENST00000520146 549 ntTSL 4 BASIC6.89□□□□□ -1.31
CTNNA1P35221 PVT1-214ENST00000522875 922 ntTSL 5 BASIC6.89□□□□□ -1.31
CTNNA1P35221 SETP17-201ENST00000534163 817 ntBASIC6.89□□□□□ -1.31
CTNNA1P35221 AC007068.2-201ENST00000543168 395 ntBASIC6.89□□□□□ -1.31
CTNNA1P35221 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC6.89□□□□□ -1.31
CTNNA1P35221 ANP32BP1-202ENST00000568553 737 ntBASIC6.89□□□□□ -1.31
CTNNA1P35221 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC6.89□□□□□ -1.31
CTNNA1P35221 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.89□□□□□ -1.31
CTNNA1P35221 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.89□□□□□ -1.31
CTNNA1P35221 MIR6731-201ENST00000614863 72 ntBASIC6.89□□□□□ -1.31
CTNNA1P35221 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC6.89□□□□□ -1.31
CTNNA1P35221 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CTNNA1P35221 AC061999.1-201ENST00000624454 177 ntBASIC6.89□□□□□ -1.31
CTNNA1P35221 AC093909.6-201ENST00000624757 775 ntBASIC6.89□□□□□ -1.31
CTNNA1P35221 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.89□□□□□ -1.31
CTNNA1P35221 AC093844.1-201ENST00000514910 1361 ntBASIC6.89□□□□□ -1.31
CTNNA1P35221 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CTNNA1P35221 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CTNNA1P35221 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CTNNA1P35221 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
CTNNA1P35221 AC027279.4-201ENST00000624371 2072 ntBASIC6.89□□□□□ -1.31
CTNNA1P35221 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.89□□□□□ -1.31
CTNNA1P35221 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.89□□□□□ -1.31
CTNNA1P35221 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.89□□□□□ -1.31
CTNNA1P35221 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
CTNNA1P35221 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CTNNA1P35221 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CTNNA1P35221 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
CTNNA1P35221 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.88□□□□□ -1.31
CTNNA1P35221 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CTNNA1P35221 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC6.88□□□□□ -1.31
CTNNA1P35221 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CTNNA1P35221 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CTNNA1P35221 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC6.88□□□□□ -1.31
CTNNA1P35221 HSPD1P1-201ENST00000503199 1726 ntBASIC6.88□□□□□ -1.31
CTNNA1P35221 AC067942.1-201ENST00000488045 1493 ntBASIC6.88□□□□□ -1.31
CTNNA1P35221 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CTNNA1P35221 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.88□□□□□ -1.31
CTNNA1P35221 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
CTNNA1P35221 AC119674.1-213ENST00000641177 1386 ntBASIC6.88□□□□□ -1.31
CTNNA1P35221 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
CTNNA1P35221 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
CTNNA1P35221 QRSL1P3-201ENST00000552666 1316 ntBASIC6.88□□□□□ -1.31
CTNNA1P35221 FUNDC2P3-201ENST00000334716 533 ntBASIC6.88□□□□□ -1.31
CTNNA1P35221 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC6.88□□□□□ -1.31
CTNNA1P35221 SNORA38B-201ENST00000363524 131 ntBASIC6.88□□□□□ -1.31
CTNNA1P35221 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CTNNA1P35221 SNORA70.9-201ENST00000384370 135 ntBASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms