Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC7.37□□□□□ -1.23
CIITAP33076 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC7.37□□□□□ -1.23
CIITAP33076 AC138207.8-204ENST00000579588 527 ntBASIC7.37□□□□□ -1.23
CIITAP33076 WBP1LP11-201ENST00000586141 328 ntBASIC7.37□□□□□ -1.23
CIITAP33076 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CIITAP33076 AC063977.7-201ENST00000594454 337 ntBASIC7.37□□□□□ -1.23
CIITAP33076 NDUFB9P1-201ENST00000604683 510 ntBASIC7.37□□□□□ -1.23
CIITAP33076 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC7.37□□□□□ -1.23
CIITAP33076 MIR6085-201ENST00000618314 110 ntBASIC7.37□□□□□ -1.23
CIITAP33076 AC073862.4-201ENST00000622982 854 ntBASIC7.37□□□□□ -1.23
CIITAP33076 LINC02495-203ENST00000636704 242 ntBASIC7.37□□□□□ -1.23
CIITAP33076 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CIITAP33076 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
CIITAP33076 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CIITAP33076 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
CIITAP33076 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
CIITAP33076 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CIITAP33076 SMG1P5-202ENST00000529428 4219 ntBASIC7.37□□□□□ -1.23
CIITAP33076 SMG1P2-201ENST00000566127 4221 ntBASIC7.37□□□□□ -1.23
CIITAP33076 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CIITAP33076 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
CIITAP33076 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CIITAP33076 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC7.36□□□□□ -1.23
CIITAP33076 MAPK10-365ENST00000641902 3825 ntBASIC7.36□□□□□ -1.23
CIITAP33076 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC7.36□□□□□ -1.23
CIITAP33076 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CIITAP33076 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
CIITAP33076 LPAL2-203ENST00000454031 2498 ntBASIC7.36□□□□□ -1.23
CIITAP33076 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CIITAP33076 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC7.36□□□□□ -1.23
CIITAP33076 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CIITAP33076 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
CIITAP33076 RNA5SP512-201ENST00000364550 120 ntBASIC7.36□□□□□ -1.23
CIITAP33076 GGA1-205ENST00000405147 575 ntTSL 4 BASIC7.36□□□□□ -1.23
CIITAP33076 RPL21P50-201ENST00000417698 477 ntBASIC7.36□□□□□ -1.23
CIITAP33076 AL360013.1-201ENST00000419031 858 ntBASIC7.36□□□□□ -1.23
CIITAP33076 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC7.36□□□□□ -1.23
CIITAP33076 AL139184.1-202ENST00000422303 222 ntBASIC7.36□□□□□ -1.23
CIITAP33076 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC7.36□□□□□ -1.23
CIITAP33076 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC7.36□□□□□ -1.23
CIITAP33076 AC234771.2-201ENST00000445718 597 ntBASIC7.36□□□□□ -1.23
CIITAP33076 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC7.36□□□□□ -1.23
CIITAP33076 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC7.36□□□□□ -1.23
CIITAP33076 AC005165.2-201ENST00000466070 380 ntBASIC7.36□□□□□ -1.23
CIITAP33076 AC022415.1-202ENST00000486612 523 ntBASIC7.36□□□□□ -1.23
CIITAP33076 RPL12P7-201ENST00000493832 494 ntBASIC7.36□□□□□ -1.23
CIITAP33076 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC7.36□□□□□ -1.23
CIITAP33076 GUSBP9-201ENST00000510138 584 ntBASIC7.36□□□□□ -1.23
CIITAP33076 NATP-201ENST00000523491 878 ntBASIC7.36□□□□□ -1.23
CIITAP33076 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC7.36□□□□□ -1.23
CIITAP33076 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC7.36□□□□□ -1.23
CIITAP33076 PLEKHA3P1-201ENST00000598554 894 ntBASIC7.36□□□□□ -1.23
CIITAP33076 AL589765.6-201ENST00000601909 549 ntBASIC7.36□□□□□ -1.23
CIITAP33076 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC7.36□□□□□ -1.23
CIITAP33076 IGKV2OR2-1-201ENST00000605129 304 ntBASIC7.36□□□□□ -1.23
CIITAP33076 AC016590.3-201ENST00000611171 753 ntBASIC7.36□□□□□ -1.23
CIITAP33076 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC7.36□□□□□ -1.23
CIITAP33076 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC7.36□□□□□ -1.23
CIITAP33076 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CIITAP33076 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CIITAP33076 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC7.36□□□□□ -1.23
CIITAP33076 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CIITAP33076 AC011455.2-201ENST00000599320 3336 ntBASIC7.36□□□□□ -1.23
CIITAP33076 AL136531.3-201ENST00000624378 3658 ntBASIC7.36□□□□□ -1.23
CIITAP33076 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
CIITAP33076 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC7.36□□□□□ -1.23
CIITAP33076 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
CIITAP33076 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
CIITAP33076 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC7.36□□□□□ -1.23
CIITAP33076 AL353743.3-201ENST00000442109 1468 ntBASIC7.36□□□□□ -1.23
CIITAP33076 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
CIITAP33076 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CIITAP33076 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC7.35□□□□□ -1.23
CIITAP33076 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC7.35□□□□□ -1.23
CIITAP33076 AC005332.9-201ENST00000620266 2921 ntBASIC7.35□□□□□ -1.23
CIITAP33076 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
CIITAP33076 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CIITAP33076 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC7.35□□□□□ -1.23
CIITAP33076 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC7.35□□□□□ -1.23
CIITAP33076 BRD7P1-201ENST00000557705 1915 ntBASIC7.35□□□□□ -1.23
CIITAP33076 UGT2B27P-201ENST00000505092 1620 ntBASIC7.35□□□□□ -1.23
CIITAP33076 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CIITAP33076 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CIITAP33076 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC7.35□□□□□ -1.23
CIITAP33076 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC7.35□□□□□ -1.23
CIITAP33076 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC7.35□□□□□ -1.23
CIITAP33076 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
CIITAP33076 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC7.35□□□□□ -1.23
CIITAP33076 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC7.35□□□□□ -1.23
CIITAP33076 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC7.35□□□□□ -1.23
CIITAP33076 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC7.35□□□□□ -1.23
CIITAP33076 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC7.35□□□□□ -1.23
CIITAP33076 SNORA74.1-201ENST00000516320 180 ntBASIC7.35□□□□□ -1.23
CIITAP33076 AC135983.3-201ENST00000528049 1226 ntBASIC7.35□□□□□ -1.23
CIITAP33076 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC7.35□□□□□ -1.23
CIITAP33076 MT1CP-201ENST00000567054 174 ntBASIC7.35□□□□□ -1.23
CIITAP33076 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CIITAP33076 AC012368.3-201ENST00000604190 219 ntBASIC7.35□□□□□ -1.23
CIITAP33076 WBP1LP12-201ENST00000604449 331 ntBASIC7.35□□□□□ -1.23
CIITAP33076 AC011891.2-201ENST00000604949 397 ntBASIC7.35□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms