Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC7.53□□□□□ -1.2
COL4A5P29400 AC027229.1-201ENST00000583887 253 ntBASIC7.53□□□□□ -1.2
COL4A5P29400 AC027348.2-201ENST00000624375 642 ntBASIC7.53□□□□□ -1.2
COL4A5P29400 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC7.53□□□□□ -1.2
COL4A5P29400 Z83820.1-201ENST00000456978 1499 ntBASIC7.53□□□□□ -1.2
COL4A5P29400 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC7.53□□□□□ -1.2
COL4A5P29400 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC7.53□□□□□ -1.2
COL4A5P29400 AL080317.3-201ENST00000607434 4315 ntBASIC7.53□□□□□ -1.2
COL4A5P29400 PRDM2-203ENST00000343137 5797 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
COL4A5P29400 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
COL4A5P29400 GBP4-201ENST00000355754 6127 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
COL4A5P29400 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC7.52□□□□□ -1.2
COL4A5P29400 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
COL4A5P29400 MEF2C-209ENST00000504921 7561 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
COL4A5P29400 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC7.52□□□□□ -1.21
COL4A5P29400 AC109780.1-201ENST00000451768 1344 ntBASIC7.52□□□□□ -1.21
COL4A5P29400 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC7.52□□□□□ -1.21
COL4A5P29400 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC7.52□□□□□ -1.21
COL4A5P29400 MYT1L-202ENST00000399161 7063 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
COL4A5P29400 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
COL4A5P29400 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC7.52□□□□□ -1.21
COL4A5P29400 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC7.52□□□□□ -1.21
COL4A5P29400 AC127526.2-201ENST00000426436 775 ntBASIC7.52□□□□□ -1.21
COL4A5P29400 NPM1P22-201ENST00000427761 952 ntBASIC7.52□□□□□ -1.21
COL4A5P29400 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC7.52□□□□□ -1.21
COL4A5P29400 VN1R38P-201ENST00000450265 887 ntBASIC7.52□□□□□ -1.21
COL4A5P29400 AC093270.2-201ENST00000486157 792 ntBASIC7.52□□□□□ -1.21
COL4A5P29400 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC7.52□□□□□ -1.21
COL4A5P29400 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC7.52□□□□□ -1.21
COL4A5P29400 AC079600.1-201ENST00000550326 297 ntBASIC7.52□□□□□ -1.21
COL4A5P29400 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
COL4A5P29400 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC7.52□□□□□ -1.21
COL4A5P29400 RUNX1T1-248ENST00000613302 7687 ntAPPRIS P3 TSL 5 BASIC7.52□□□□□ -1.21
COL4A5P29400 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
COL4A5P29400 AC138915.4-201ENST00000565549 4147 ntBASIC7.52□□□□□ -1.21
COL4A5P29400 RTN3-202ENST00000339997 4886 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
COL4A5P29400 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
COL4A5P29400 WDR19-201ENST00000399820 4520 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
COL4A5P29400 AC011416.1-201ENST00000514947 1732 ntBASIC7.52□□□□□ -1.21
COL4A5P29400 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
COL4A5P29400 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
COL4A5P29400 F5-202ENST00000367797 7024 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
COL4A5P29400 ZHX3-218ENST00000560364 4283 ntTSL 5 BASIC7.51□□□□□ -1.21
COL4A5P29400 MRPS23-201ENST00000313608 5621 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
COL4A5P29400 CREB3L2-201ENST00000330387 7412 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
COL4A5P29400 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
COL4A5P29400 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC7.51□□□□□ -1.21
COL4A5P29400 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC7.51□□□□□ -1.21
COL4A5P29400 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
COL4A5P29400 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC7.51□□□□□ -1.21
COL4A5P29400 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC7.51□□□□□ -1.21
COL4A5P29400 GAS5-218ENST00000448718 565 ntTSL 2 BASIC7.51□□□□□ -1.21
COL4A5P29400 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
COL4A5P29400 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
COL4A5P29400 MTND6P16-201ENST00000504006 520 ntBASIC7.51□□□□□ -1.21
COL4A5P29400 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
COL4A5P29400 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC7.51□□□□□ -1.21
COL4A5P29400 AC092375.1-201ENST00000550410 637 ntBASIC7.51□□□□□ -1.21
COL4A5P29400 BICD1-206ENST00000551086 423 ntTSL 3 BASIC7.51□□□□□ -1.21
COL4A5P29400 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC7.51□□□□□ -1.21
COL4A5P29400 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC7.51□□□□□ -1.21
COL4A5P29400 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC7.51□□□□□ -1.21
COL4A5P29400 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC7.51□□□□□ -1.21
COL4A5P29400 CCT5-215ENST00000625723 135 ntTSL 5 BASIC7.51□□□□□ -1.21
COL4A5P29400 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC7.51□□□□□ -1.21
COL4A5P29400 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC7.51□□□□□ -1.21
COL4A5P29400 AC009948.5-201ENST00000624360 4406 ntBASIC7.51□□□□□ -1.21
COL4A5P29400 UNC79-201ENST00000256339 8400 ntAPPRIS P2 TSL 5 BASIC7.51□□□□□ -1.21
COL4A5P29400 ASB8-201ENST00000317697 2615 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
COL4A5P29400 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
COL4A5P29400 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
COL4A5P29400 MAPK10-287ENST00000641217 3037 ntBASIC7.51□□□□□ -1.21
COL4A5P29400 MDM2-202ENST00000258149 12633 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
COL4A5P29400 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
COL4A5P29400 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC7.51□□□□□ -1.21
COL4A5P29400 BACH2-201ENST00000257749 9113 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
COL4A5P29400 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC7.51□□□□□ -1.21
COL4A5P29400 AL161901.1-201ENST00000624954 3425 ntBASIC7.51□□□□□ -1.21
COL4A5P29400 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC7.51□□□□□ -1.21
COL4A5P29400 RNA5SP156-201ENST00000410250 110 ntBASIC7.51□□□□□ -1.21
COL4A5P29400 RN7SKP161-201ENST00000411110 305 ntBASIC7.51□□□□□ -1.21
COL4A5P29400 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC7.51□□□□□ -1.21
COL4A5P29400 AC002486.2-201ENST00000447806 590 ntBASIC7.51□□□□□ -1.21
COL4A5P29400 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
COL4A5P29400 RN7SL269P-201ENST00000467795 305 ntBASIC7.51□□□□□ -1.21
COL4A5P29400 RPSAP37-201ENST00000470913 821 ntBASIC7.51□□□□□ -1.21
COL4A5P29400 COPS8P2-201ENST00000473228 627 ntBASIC7.51□□□□□ -1.21
COL4A5P29400 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC7.51□□□□□ -1.21
COL4A5P29400 IGKV1D-22-201ENST00000518953 324 ntBASIC7.51□□□□□ -1.21
COL4A5P29400 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC7.51□□□□□ -1.21
COL4A5P29400 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
COL4A5P29400 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC7.51□□□□□ -1.21
COL4A5P29400 AC020916.2-201ENST00000591242 360 ntBASIC7.51□□□□□ -1.21
COL4A5P29400 AC078880.4-201ENST00000617627 1749 ntBASIC7.51□□□□□ -1.21
COL4A5P29400 AL357562.1-201ENST00000624911 609 ntBASIC7.51□□□□□ -1.21
COL4A5P29400 WDR75-207ENST00000631047 270 ntTSL 5 BASIC7.51□□□□□ -1.21
COL4A5P29400 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC7.51□□□□□ -1.21
COL4A5P29400 DOCK1-201ENST00000280333 6797 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
COL4A5P29400 ADAM22-205ENST00000398209 9144 ntAPPRIS P4 TSL 1 (best) BASIC7.5□□□□□ -1.21
COL4A5P29400 KIF13A-203ENST00000378814 6924 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms