Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL5A1P20908 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL5A1P20908 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL5A1P20908 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC6.19□□□□□ -1.42
COL5A1P20908 PARN-201ENST00000341484 2100 ntTSL 2 BASIC6.19□□□□□ -1.42
COL5A1P20908 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC6.19□□□□□ -1.42
COL5A1P20908 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC6.19□□□□□ -1.42
COL5A1P20908 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL5A1P20908 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC6.18□□□□□ -1.42
COL5A1P20908 CCNT2-202ENST00000295238 4491 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL5A1P20908 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
COL5A1P20908 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL5A1P20908 TP53BP1-201ENST00000263801 6346 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL5A1P20908 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.18□□□□□ -1.42
COL5A1P20908 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL5A1P20908 AC130360.1-201ENST00000425489 1117 ntBASIC6.18□□□□□ -1.42
COL5A1P20908 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC6.18□□□□□ -1.42
COL5A1P20908 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL5A1P20908 AL645936.1-201ENST00000441979 518 ntBASIC6.18□□□□□ -1.42
COL5A1P20908 RPL12P31-201ENST00000478433 450 ntBASIC6.18□□□□□ -1.42
COL5A1P20908 AC130365.2-201ENST00000525882 1201 ntBASIC6.18□□□□□ -1.42
COL5A1P20908 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.18□□□□□ -1.42
COL5A1P20908 AC020978.7-201ENST00000575953 1187 ntBASIC6.18□□□□□ -1.42
COL5A1P20908 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.18□□□□□ -1.42
COL5A1P20908 AC090236.2-201ENST00000587933 1101 ntBASIC6.18□□□□□ -1.42
COL5A1P20908 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.18□□□□□ -1.42
COL5A1P20908 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
COL5A1P20908 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.18□□□□□ -1.42
COL5A1P20908 MIR6826-201ENST00000617808 98 ntBASIC6.18□□□□□ -1.42
COL5A1P20908 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.18□□□□□ -1.42
COL5A1P20908 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC6.18□□□□□ -1.42
COL5A1P20908 CGA-206ENST00000630630 832 ntTSL 2 BASIC6.18□□□□□ -1.42
COL5A1P20908 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.18□□□□□ -1.42
COL5A1P20908 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.18□□□□□ -1.42
COL5A1P20908 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.18□□□□□ -1.42
COL5A1P20908 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.18□□□□□ -1.42
COL5A1P20908 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.18□□□□□ -1.42
COL5A1P20908 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL5A1P20908 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL5A1P20908 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL5A1P20908 AC008937.3-201ENST00000606813 1700 ntBASIC6.18□□□□□ -1.42
COL5A1P20908 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC6.18□□□□□ -1.42
COL5A1P20908 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL5A1P20908 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.18□□□□□ -1.42
COL5A1P20908 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
COL5A1P20908 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL5A1P20908 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL5A1P20908 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.18□□□□□ -1.42
COL5A1P20908 HSPD1P9-201ENST00000420325 1636 ntBASIC6.18□□□□□ -1.42
COL5A1P20908 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC6.18□□□□□ -1.42
COL5A1P20908 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
COL5A1P20908 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL5A1P20908 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
COL5A1P20908 DOCK8-205ENST00000453981 7237 ntTSL 5 BASIC6.18□□□□□ -1.42
COL5A1P20908 RBMXL1-202ENST00000399794 5084 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
COL5A1P20908 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
COL5A1P20908 TMSB4XP4-201ENST00000323496 618 ntBASIC6.18□□□□□ -1.42
COL5A1P20908 RPL31P15-201ENST00000449770 338 ntBASIC6.18□□□□□ -1.42
COL5A1P20908 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.18□□□□□ -1.42
COL5A1P20908 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.18□□□□□ -1.42
COL5A1P20908 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.18□□□□□ -1.42
COL5A1P20908 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.18□□□□□ -1.42
COL5A1P20908 AC016769.4-201ENST00000616893 535 ntBASIC6.18□□□□□ -1.42
COL5A1P20908 MRPL57P1-201ENST00000621486 265 ntBASIC6.18□□□□□ -1.42
COL5A1P20908 AL355306.2-203ENST00000635102 1025 ntTSL 5 BASIC6.18□□□□□ -1.42
COL5A1P20908 CASC19-238ENST00000641523 1558 ntBASIC6.18□□□□□ -1.42
COL5A1P20908 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.18□□□□□ -1.42
COL5A1P20908 C20orf194-201ENST00000252032 6869 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
COL5A1P20908 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
COL5A1P20908 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC6.17□□□□□ -1.42
COL5A1P20908 ONECUT2-202ENST00000491143 16121 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL5A1P20908 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COL5A1P20908 AL133243.2-201ENST00000610331 1621 ntBASIC6.17□□□□□ -1.42
COL5A1P20908 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL5A1P20908 CYP2G2P-201ENST00000594920 1485 ntBASIC6.17□□□□□ -1.42
COL5A1P20908 ZSWIM5P3-201ENST00000511265 2743 ntBASIC6.17□□□□□ -1.42
COL5A1P20908 CTNND1-221ENST00000529873 5931 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COL5A1P20908 CTNND1-227ENST00000530748 5925 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COL5A1P20908 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COL5A1P20908 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL5A1P20908 OPCML-203ENST00000524381 6424 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COL5A1P20908 NBPF12-202ENST00000579935 5035 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
COL5A1P20908 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL5A1P20908 AC130360.2-201ENST00000533477 1556 ntBASIC6.17□□□□□ -1.42
COL5A1P20908 ANAPC1-201ENST00000341068 8262 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL5A1P20908 CR788268.1-201ENST00000603931 1809 ntBASIC6.17□□□□□ -1.42
COL5A1P20908 RNF145-205ENST00000518802 2603 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COL5A1P20908 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COL5A1P20908 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
COL5A1P20908 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC6.17□□□□□ -1.42
COL5A1P20908 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC6.17□□□□□ -1.42
COL5A1P20908 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COL5A1P20908 AC005077.1-201ENST00000449226 375 ntBASIC6.17□□□□□ -1.42
COL5A1P20908 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC6.17□□□□□ -1.42
COL5A1P20908 AC098847.1-201ENST00000473094 348 ntBASIC6.17□□□□□ -1.42
COL5A1P20908 MTND6P8-201ENST00000503471 522 ntBASIC6.17□□□□□ -1.42
COL5A1P20908 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC6.17□□□□□ -1.42
COL5A1P20908 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.17□□□□□ -1.42
COL5A1P20908 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.17□□□□□ -1.42
COL5A1P20908 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms