Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC4.87□□□□□ -1.63
HLA-DQA1P01909 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC4.87□□□□□ -1.63
HLA-DQA1P01909 ORMDL2-203ENST00000548974 671 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
HLA-DQA1P01909 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC4.87□□□□□ -1.63
HLA-DQA1P01909 AC013489.1-201ENST00000561140 598 ntTSL 3 BASIC4.87□□□□□ -1.63
HLA-DQA1P01909 AC009119.1-202ENST00000567342 543 ntTSL 4 BASIC4.87□□□□□ -1.63
HLA-DQA1P01909 AC091178.1-204ENST00000577328 366 ntTSL 4 BASIC4.87□□□□□ -1.63
HLA-DQA1P01909 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC4.87□□□□□ -1.63
HLA-DQA1P01909 AP001357.1-201ENST00000586304 1053 ntBASIC4.87□□□□□ -1.63
HLA-DQA1P01909 AC020914.7-201ENST00000594477 545 ntBASIC4.87□□□□□ -1.63
HLA-DQA1P01909 LINC00632-203ENST00000602535 723 ntTSL 5 BASIC4.87□□□□□ -1.63
HLA-DQA1P01909 AC025857.2-201ENST00000602711 238 ntBASIC4.87□□□□□ -1.63
HLA-DQA1P01909 ACTG1P22-201ENST00000603793 1099 ntBASIC4.87□□□□□ -1.63
HLA-DQA1P01909 AL592504.1-201ENST00000605319 439 ntBASIC4.87□□□□□ -1.63
HLA-DQA1P01909 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC4.87□□□□□ -1.63
HLA-DQA1P01909 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DQA1P01909 AC104073.4-201ENST00000632111 598 ntTSL 2 BASIC4.87□□□□□ -1.63
HLA-DQA1P01909 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DQA1P01909 NCOA4P2-201ENST00000340589 1813 ntBASIC4.87□□□□□ -1.63
HLA-DQA1P01909 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DQA1P01909 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC4.87□□□□□ -1.63
HLA-DQA1P01909 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DQA1P01909 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC4.87□□□□□ -1.63
HLA-DQA1P01909 AC114876.1-201ENST00000490962 1366 ntBASIC4.87□□□□□ -1.63
HLA-DQA1P01909 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC4.87□□□□□ -1.63
HLA-DQA1P01909 AL049869.1-201ENST00000556933 1402 ntBASIC4.87□□□□□ -1.63
HLA-DQA1P01909 HYKK-205ENST00000566332 1422 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DQA1P01909 AC009831.5-201ENST00000624000 3189 ntBASIC4.87□□□□□ -1.63
HLA-DQA1P01909 AL162456.1-201ENST00000634535 2006 ntBASIC4.87□□□□□ -1.63
HLA-DQA1P01909 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DQA1P01909 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC4.87□□□□□ -1.63
HLA-DQA1P01909 AL359263.1-201ENST00000441188 2796 ntBASIC4.87□□□□□ -1.63
HLA-DQA1P01909 AC130360.2-201ENST00000533477 1556 ntBASIC4.87□□□□□ -1.63
HLA-DQA1P01909 ZNF969P-201ENST00000510345 2341 ntBASIC4.86□□□□□ -1.63
HLA-DQA1P01909 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC4.86□□□□□ -1.63
HLA-DQA1P01909 BTK-209ENST00000618050 2417 ntTSL 5 BASIC4.86□□□□□ -1.63
HLA-DQA1P01909 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
HLA-DQA1P01909 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DQA1P01909 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC4.86□□□□□ -1.63
HLA-DQA1P01909 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC4.86□□□□□ -1.63
HLA-DQA1P01909 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC4.86□□□□□ -1.63
HLA-DQA1P01909 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DQA1P01909 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DQA1P01909 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
HLA-DQA1P01909 RNU1-38P-201ENST00000362817 144 ntBASIC4.86□□□□□ -1.63
HLA-DQA1P01909 SNORD1C-201ENST00000363315 78 ntBASIC4.86□□□□□ -1.63
HLA-DQA1P01909 SNORA30B-201ENST00000365319 129 ntBASIC4.86□□□□□ -1.63
HLA-DQA1P01909 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DQA1P01909 ARMCX7P-201ENST00000372828 562 ntBASIC4.86□□□□□ -1.63
HLA-DQA1P01909 PPIAP26-201ENST00000377951 522 ntBASIC4.86□□□□□ -1.63
HLA-DQA1P01909 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC4.86□□□□□ -1.63
HLA-DQA1P01909 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC4.86□□□□□ -1.63
HLA-DQA1P01909 AL158070.1-201ENST00000421614 631 ntTSL 2 BASIC4.86□□□□□ -1.63
HLA-DQA1P01909 AC093107.1-201ENST00000422772 609 ntBASIC4.86□□□□□ -1.63
HLA-DQA1P01909 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC4.86□□□□□ -1.63
HLA-DQA1P01909 AF274573.1-201ENST00000430535 494 ntBASIC4.86□□□□□ -1.63
HLA-DQA1P01909 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC4.86□□□□□ -1.63
HLA-DQA1P01909 ATP5LP4-201ENST00000434169 307 ntBASIC4.86□□□□□ -1.63
HLA-DQA1P01909 AC018892.2-201ENST00000457656 693 ntBASIC4.86□□□□□ -1.63
HLA-DQA1P01909 RPS4XP19-201ENST00000460237 736 ntBASIC4.86□□□□□ -1.63
HLA-DQA1P01909 AC090602.1-201ENST00000469695 252 ntBASIC4.86□□□□□ -1.63
HLA-DQA1P01909 RPL23AP80-201ENST00000495605 424 ntBASIC4.86□□□□□ -1.63
HLA-DQA1P01909 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
HLA-DQA1P01909 AC097460.2-201ENST00000511857 741 ntBASIC4.86□□□□□ -1.63
HLA-DQA1P01909 AC117383.2-201ENST00000514722 322 ntBASIC4.86□□□□□ -1.63
HLA-DQA1P01909 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC4.86□□□□□ -1.63
HLA-DQA1P01909 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC4.86□□□□□ -1.63
HLA-DQA1P01909 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC4.86□□□□□ -1.63
HLA-DQA1P01909 LINC00678-202ENST00000534757 798 ntTSL 3 BASIC4.86□□□□□ -1.63
HLA-DQA1P01909 RNASE11-206ENST00000553849 1101 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DQA1P01909 NPM1P42-201ENST00000560329 862 ntBASIC4.86□□□□□ -1.63
HLA-DQA1P01909 AC025430.1-201ENST00000561324 498 ntTSL 3 BASIC4.86□□□□□ -1.63
HLA-DQA1P01909 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC4.86□□□□□ -1.63
HLA-DQA1P01909 MRPL45P2-203ENST00000573318 473 ntBASIC4.86□□□□□ -1.63
HLA-DQA1P01909 STARD6-204ENST00000584040 660 ntTSL 3 BASIC4.86□□□□□ -1.63
HLA-DQA1P01909 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DQA1P01909 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC4.86□□□□□ -1.63
HLA-DQA1P01909 BUB1P1-201ENST00000603541 607 ntBASIC4.86□□□□□ -1.63
HLA-DQA1P01909 AL356986.1-201ENST00000604085 341 ntBASIC4.86□□□□□ -1.63
HLA-DQA1P01909 AL049829.3-202ENST00000604278 711 ntBASIC4.86□□□□□ -1.63
HLA-DQA1P01909 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC4.86□□□□□ -1.63
HLA-DQA1P01909 AL445649.1-201ENST00000615941 691 ntBASIC4.86□□□□□ -1.63
HLA-DQA1P01909 AC087893.2-201ENST00000623272 255 ntBASIC4.86□□□□□ -1.63
HLA-DQA1P01909 AC211433.3-201ENST00000623770 375 ntBASIC4.86□□□□□ -1.63
HLA-DQA1P01909 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC4.86□□□□□ -1.63
HLA-DQA1P01909 NEK2P2-201ENST00000438441 1338 ntBASIC4.86□□□□□ -1.63
HLA-DQA1P01909 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DQA1P01909 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DQA1P01909 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.86□□□□□ -1.63
HLA-DQA1P01909 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
HLA-DQA1P01909 XKRY2-202ENST00000623874 1581 ntBASIC4.86□□□□□ -1.63
HLA-DQA1P01909 XKRY-202ENST00000624960 1581 ntBASIC4.86□□□□□ -1.63
HLA-DQA1P01909 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DQA1P01909 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DQA1P01909 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
HLA-DQA1P01909 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC4.86□□□□□ -1.63
HLA-DQA1P01909 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
HLA-DQA1P01909 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DQA1P01909 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DQA1P01909 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms