Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC6.07□□□□□ -1.44
SSX4O60224 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
SSX4O60224 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
SSX4O60224 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SSX4O60224 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC6.07□□□□□ -1.44
SSX4O60224 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.07□□□□□ -1.44
SSX4O60224 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.07□□□□□ -1.44
SSX4O60224 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SSX4O60224 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.07□□□□□ -1.44
SSX4O60224 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC6.06□□□□□ -1.44
SSX4O60224 AC009779.8-201ENST00000641684 4384 ntBASIC6.06□□□□□ -1.44
SSX4O60224 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SSX4O60224 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SSX4O60224 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
SSX4O60224 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.06□□□□□ -1.44
SSX4O60224 AC119674.1-204ENST00000641348 1343 ntBASIC6.06□□□□□ -1.44
SSX4O60224 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
SSX4O60224 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.06□□□□□ -1.44
SSX4O60224 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC6.06□□□□□ -1.44
SSX4O60224 AL035563.1-201ENST00000609087 1539 ntBASIC6.06□□□□□ -1.44
SSX4O60224 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SSX4O60224 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
SSX4O60224 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SSX4O60224 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SSX4O60224 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
SSX4O60224 RNA5SP472-201ENST00000363868 119 ntBASIC6.06□□□□□ -1.44
SSX4O60224 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SSX4O60224 MIR152-201ENST00000385212 87 ntBASIC6.06□□□□□ -1.44
SSX4O60224 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
SSX4O60224 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
SSX4O60224 RNA5SP251-201ENST00000410614 137 ntBASIC6.06□□□□□ -1.44
SSX4O60224 RPL23AP18-201ENST00000416139 468 ntBASIC6.06□□□□□ -1.44
SSX4O60224 VDAC1P10-201ENST00000416715 891 ntBASIC6.06□□□□□ -1.44
SSX4O60224 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SSX4O60224 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SSX4O60224 SNRPEP5-201ENST00000425442 278 ntBASIC6.06□□□□□ -1.44
SSX4O60224 RPL34P27-201ENST00000428810 349 ntBASIC6.06□□□□□ -1.44
SSX4O60224 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC6.06□□□□□ -1.44
SSX4O60224 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SSX4O60224 MRPS21P3-201ENST00000436696 262 ntBASIC6.06□□□□□ -1.44
SSX4O60224 RPEP4-201ENST00000437636 602 ntBASIC6.06□□□□□ -1.44
SSX4O60224 AC096632.2-201ENST00000438139 1239 ntBASIC6.06□□□□□ -1.44
SSX4O60224 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC6.06□□□□□ -1.44
SSX4O60224 AL845321.1-201ENST00000444603 348 ntBASIC6.06□□□□□ -1.44
SSX4O60224 TVP23CP1-201ENST00000450317 639 ntBASIC6.06□□□□□ -1.44
SSX4O60224 EAF2-202ENST00000451944 960 ntTSL 2 BASIC6.06□□□□□ -1.44
SSX4O60224 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC6.06□□□□□ -1.44
SSX4O60224 AC079193.1-201ENST00000460497 588 ntBASIC6.06□□□□□ -1.44
SSX4O60224 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SSX4O60224 AC005165.2-201ENST00000466070 380 ntBASIC6.06□□□□□ -1.44
SSX4O60224 MTND3P6-201ENST00000485242 339 ntBASIC6.06□□□□□ -1.44
SSX4O60224 RN7SL350P-201ENST00000492591 299 ntBASIC6.06□□□□□ -1.44
SSX4O60224 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SSX4O60224 AC008967.1-201ENST00000504843 163 ntBASIC6.06□□□□□ -1.44
SSX4O60224 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC6.06□□□□□ -1.44
SSX4O60224 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC6.06□□□□□ -1.44
SSX4O60224 AC100854.1-201ENST00000520351 341 ntBASIC6.06□□□□□ -1.44
SSX4O60224 KCTD9P4-201ENST00000526766 1166 ntBASIC6.06□□□□□ -1.44
SSX4O60224 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC6.06□□□□□ -1.44
SSX4O60224 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC6.06□□□□□ -1.44
SSX4O60224 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC6.06□□□□□ -1.44
SSX4O60224 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC6.06□□□□□ -1.44
SSX4O60224 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC6.06□□□□□ -1.44
SSX4O60224 AP000919.1-201ENST00000582850 985 ntBASIC6.06□□□□□ -1.44
SSX4O60224 MIR4428-201ENST00000584884 73 ntBASIC6.06□□□□□ -1.44
SSX4O60224 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC6.06□□□□□ -1.44
SSX4O60224 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
SSX4O60224 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SSX4O60224 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC6.06□□□□□ -1.44
SSX4O60224 AC140479.4-205ENST00000636339 820 ntBASIC6.06□□□□□ -1.44
SSX4O60224 AC007603.3-201ENST00000636915 979 ntBASIC6.06□□□□□ -1.44
SSX4O60224 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC6.06□□□□□ -1.44
SSX4O60224 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC6.06□□□□□ -1.44
SSX4O60224 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SSX4O60224 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SSX4O60224 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SSX4O60224 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.06□□□□□ -1.44
SSX4O60224 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
SSX4O60224 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
SSX4O60224 AC123769.1-201ENST00000530992 3192 ntBASIC6.06□□□□□ -1.44
SSX4O60224 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SSX4O60224 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SSX4O60224 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
SSX4O60224 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC6.05□□□□□ -1.44
SSX4O60224 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
SSX4O60224 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SSX4O60224 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SSX4O60224 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SSX4O60224 AC067942.1-201ENST00000488045 1493 ntBASIC6.05□□□□□ -1.44
SSX4O60224 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SSX4O60224 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SSX4O60224 MIR99A-201ENST00000384906 81 ntBASIC6.05□□□□□ -1.44
SSX4O60224 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SSX4O60224 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.05□□□□□ -1.44
SSX4O60224 RN7SKP85-201ENST00000411349 318 ntBASIC6.05□□□□□ -1.44
SSX4O60224 MTATP6P19-201ENST00000413797 659 ntBASIC6.05□□□□□ -1.44
SSX4O60224 AC244453.4-201ENST00000419150 388 ntBASIC6.05□□□□□ -1.44
SSX4O60224 AK3P5-201ENST00000432033 519 ntBASIC6.05□□□□□ -1.44
SSX4O60224 GAPDHP34-201ENST00000432112 823 ntBASIC6.05□□□□□ -1.44
SSX4O60224 RPL3P11-201ENST00000434028 1146 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms