Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 RN7SL435P-201ENST00000584418 282 ntBASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 LINC01535-204ENST00000591116 815 ntTSL 3 BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 AC116165.3-201ENST00000614524 400 ntBASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 Metazoa_SRP.72-201ENST00000617458 278 ntBASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 AC026367.3-201ENST00000619032 590 ntBASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 AP001264.1-201ENST00000620602 703 ntBASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 AC021766.1-201ENST00000624404 741 ntBASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 AC114546.4-201ENST00000624413 369 ntBASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 OR9K2-204ENST00000641374 1122 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 LINC01355-201ENST00000566551 5444 ntBASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 MAPK10-286ENST00000641208 8747 ntBASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 EEF1A1P15-201ENST00000395772 1408 ntBASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 AC024587.1-201ENST00000505925 2157 ntBASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 AL357556.1-201ENST00000421884 1388 ntBASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 PYHIN1-202ENST00000368138 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 RNA5SP472-201ENST00000363868 119 ntBASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 HSD17B7-203ENST00000367915 507 ntTSL 2 BASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 AC234778.1-201ENST00000399253 370 ntBASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 RFKP1-201ENST00000400940 428 ntBASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 AL078599.1-201ENST00000402075 293 ntBASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 AL353151.1-201ENST00000402406 604 ntBASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 CYCSP17-201ENST00000407870 315 ntBASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 Z68694.1-201ENST00000413929 841 ntBASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 AL133482.1-201ENST00000415988 498 ntBASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 MRPL45P2-201ENST00000425159 927 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 AL392088.1-201ENST00000428364 670 ntBASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 OSBPL10-AS1-204ENST00000436598 513 ntTSL 3 BASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 TTC28-AS1-216ENST00000437713 854 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 LYSMD1-202ENST00000440902 1003 ntTSL 2 BASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 RPL10P1-201ENST00000447844 644 ntBASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 MARK2P14-201ENST00000449657 628 ntBASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 AL162739.1-201ENST00000450606 307 ntBASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 OR52E3P-201ENST00000452083 936 ntBASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 RAB28P2-201ENST00000454299 641 ntBASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 AC239859.3-201ENST00000456469 408 ntTSL 5 BASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 IL20RB-AS1-201ENST00000462176 562 ntTSL 4 BASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 AC021660.1-201ENST00000465006 554 ntBASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 RPL23AP64-201ENST00000469465 435 ntBASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 AF111169.1-201ENST00000469811 374 ntBASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 NIP7P2-201ENST00000485801 544 ntBASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 ARL4AP1-201ENST00000503220 705 ntBASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 TMEM161B-207ENST00000509387 963 ntTSL 2 BASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 AC103719.1-201ENST00000517994 581 ntTSL 4 BASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 AC022639.1-204ENST00000520365 569 ntTSL 4 BASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 AC009630.2-201ENST00000524133 570 ntTSL 5 BASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 AP003532.1-201ENST00000529936 310 ntBASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 OR7E96P-201ENST00000530816 976 ntBASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 TMEM107-209ENST00000533070 726 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 AC060814.3-201ENST00000557717 460 ntBASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 AC090971.3-201ENST00000557871 1041 ntBASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 MESTP2-201ENST00000559787 889 ntBASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 AL163952.1-202ENST00000569625 600 ntBASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 BOD1P2-201ENST00000578494 481 ntBASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 MIR4682-201ENST00000580643 80 ntBASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 MIR4450-201ENST00000583589 65 ntBASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC3.17□□□□□ -1.9
LINC01558Q9Y6Z2 HIGD1B-205ENST00000591513 547 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms