Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 PART1-203ENST00000515734 2569 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
RIMBP3Q9UFD9 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
RIMBP3Q9UFD9 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
RIMBP3Q9UFD9 SYNJ1-206ENST00000433931 4852 ntAPPRIS P4 TSL 1 (best) BASIC9.92□□□□□ -0.82
RIMBP3Q9UFD9 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
RIMBP3Q9UFD9 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
RIMBP3Q9UFD9 AC245047.2-201ENST00000441060 530 ntBASIC9.92□□□□□ -0.82
RIMBP3Q9UFD9 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC9.92□□□□□ -0.82
RIMBP3Q9UFD9 AP001922.4-201ENST00000526967 290 ntBASIC9.92□□□□□ -0.82
RIMBP3Q9UFD9 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC9.92□□□□□ -0.82
RIMBP3Q9UFD9 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC9.92□□□□□ -0.82
RIMBP3Q9UFD9 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
RIMBP3Q9UFD9 GON4L-219ENST00000622608 4801 ntTSL 5 BASIC9.92□□□□□ -0.82
RIMBP3Q9UFD9 FAT1-201ENST00000441802 14786 ntAPPRIS P2 TSL 5 BASIC9.92□□□□□ -0.82
RIMBP3Q9UFD9 NDUFS1-204ENST00000440274 2394 ntTSL 2 BASIC9.92□□□□□ -0.82
RIMBP3Q9UFD9 TANC2-201ENST00000389520 6404 ntTSL 5 BASIC9.92□□□□□ -0.82
RIMBP3Q9UFD9 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
RIMBP3Q9UFD9 TRERF1-204ENST00000372922 7286 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
RIMBP3Q9UFD9 KANSL3-206ENST00000431828 5153 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
RIMBP3Q9UFD9 UNC5C-201ENST00000453304 9875 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
RIMBP3Q9UFD9 SRGAP2B-204ENST00000612199 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
RIMBP3Q9UFD9 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
RIMBP3Q9UFD9 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
RIMBP3Q9UFD9 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
RIMBP3Q9UFD9 ZNF217-202ENST00000371471 5796 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
RIMBP3Q9UFD9 RNU1-106P-201ENST00000384382 164 ntBASIC9.91□□□□□ -0.82
RIMBP3Q9UFD9 AL354868.1-201ENST00000417077 482 ntBASIC9.91□□□□□ -0.82
RIMBP3Q9UFD9 PPIAP10-201ENST00000438675 458 ntBASIC9.91□□□□□ -0.82
RIMBP3Q9UFD9 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC9.91□□□□□ -0.82
RIMBP3Q9UFD9 LRRC37A14P-201ENST00000452297 462 ntBASIC9.91□□□□□ -0.82
RIMBP3Q9UFD9 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC9.91□□□□□ -0.82
RIMBP3Q9UFD9 RPS14P8-201ENST00000478778 369 ntBASIC9.91□□□□□ -0.82
RIMBP3Q9UFD9 Y_RNA.710-201ENST00000516975 110 ntBASIC9.91□□□□□ -0.82
RIMBP3Q9UFD9 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC9.91□□□□□ -0.82
RIMBP3Q9UFD9 AC006530.1-201ENST00000555980 571 ntBASIC9.91□□□□□ -0.82
RIMBP3Q9UFD9 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC9.91□□□□□ -0.82
RIMBP3Q9UFD9 AC096996.1-201ENST00000563813 325 ntBASIC9.91□□□□□ -0.82
RIMBP3Q9UFD9 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC9.91□□□□□ -0.82
RIMBP3Q9UFD9 MASP1-205ENST00000392472 3900 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
RIMBP3Q9UFD9 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
RIMBP3Q9UFD9 DISP1-201ENST00000284476 4762 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
RIMBP3Q9UFD9 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
RIMBP3Q9UFD9 RABEP1-201ENST00000341923 2490 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
RIMBP3Q9UFD9 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
RIMBP3Q9UFD9 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
RIMBP3Q9UFD9 KBTBD11-OT1-204ENST00000635855 6169 ntAPPRIS P5 TSL 5 BASIC9.91□□□□□ -0.82
RIMBP3Q9UFD9 SLC26A9-202ENST00000367134 4616 ntTSL 5 BASIC9.9□□□□□ -0.82
RIMBP3Q9UFD9 YTHDC2-201ENST00000161863 6316 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
RIMBP3Q9UFD9 PHLPP2-206ENST00000568954 8317 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
RIMBP3Q9UFD9 ADCY10P1-203ENST00000567255 4569 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
RIMBP3Q9UFD9 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
RIMBP3Q9UFD9 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC9.9□□□□□ -0.82
RIMBP3Q9UFD9 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC9.9□□□□□ -0.82
RIMBP3Q9UFD9 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC9.9□□□□□ -0.82
RIMBP3Q9UFD9 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC9.9□□□□□ -0.82
RIMBP3Q9UFD9 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC9.9□□□□□ -0.82
RIMBP3Q9UFD9 TPT1P13-201ENST00000449760 499 ntBASIC9.9□□□□□ -0.82
RIMBP3Q9UFD9 EIF4EBP2P1-201ENST00000450009 343 ntBASIC9.9□□□□□ -0.82
RIMBP3Q9UFD9 SNORA43.3-201ENST00000517240 103 ntBASIC9.9□□□□□ -0.82
RIMBP3Q9UFD9 BICD1-206ENST00000551086 423 ntTSL 3 BASIC9.9□□□□□ -0.82
RIMBP3Q9UFD9 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC9.9□□□□□ -0.82
RIMBP3Q9UFD9 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC9.9□□□□□ -0.82
RIMBP3Q9UFD9 ZNF568-215ENST00000617745 2441 ntTSL 5 BASIC9.9□□□□□ -0.82
RIMBP3Q9UFD9 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
RIMBP3Q9UFD9 OPTN-203ENST00000378748 3521 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
RIMBP3Q9UFD9 GNL2P1-201ENST00000451274 2190 ntBASIC9.9□□□□□ -0.82
RIMBP3Q9UFD9 KALRN-211ENST00000460856 6509 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
RIMBP3Q9UFD9 AC024651.2-201ENST00000562480 2098 ntBASIC9.9□□□□□ -0.82
RIMBP3Q9UFD9 MYOCD-201ENST00000343344 2817 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
RIMBP3Q9UFD9 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
RIMBP3Q9UFD9 AP000542.3-201ENST00000623391 6114 ntBASIC9.9□□□□□ -0.83
RIMBP3Q9UFD9 WDR78-203ENST00000371026 3848 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
RIMBP3Q9UFD9 KIF4CP-201ENST00000422742 1279 ntBASIC9.89□□□□□ -0.83
RIMBP3Q9UFD9 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC9.89□□□□□ -0.83
RIMBP3Q9UFD9 RN7SL738P-201ENST00000470264 297 ntBASIC9.89□□□□□ -0.83
RIMBP3Q9UFD9 AC100832.1-201ENST00000471945 383 ntBASIC9.89□□□□□ -0.83
RIMBP3Q9UFD9 BX284632.1-201ENST00000478218 541 ntBASIC9.89□□□□□ -0.83
RIMBP3Q9UFD9 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC9.89□□□□□ -0.83
RIMBP3Q9UFD9 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC9.89□□□□□ -0.83
RIMBP3Q9UFD9 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC9.89□□□□□ -0.83
RIMBP3Q9UFD9 AL645933.2-201ENST00000606743 1207 ntBASIC9.89□□□□□ -0.83
RIMBP3Q9UFD9 FAM25E-202ENST00000608562 189 ntBASIC9.89□□□□□ -0.83
RIMBP3Q9UFD9 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
RIMBP3Q9UFD9 MIR7159-201ENST00000620587 66 ntBASIC9.89□□□□□ -0.83
RIMBP3Q9UFD9 SZT2-209ENST00000562955 13968 ntAPPRIS P2 TSL 5 BASIC9.89□□□□□ -0.83
RIMBP3Q9UFD9 ITGA11-202ENST00000423218 10192 ntAPPRIS ALT1 TSL 2 BASIC9.89□□□□□ -0.83
RIMBP3Q9UFD9 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
RIMBP3Q9UFD9 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC9.89□□□□□ -0.83
RIMBP3Q9UFD9 LGALS8-212ENST00000450372 6281 ntAPPRIS P4 TSL 1 (best) BASIC9.89□□□□□ -0.83
RIMBP3Q9UFD9 NEMP1-202ENST00000379391 5370 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
RIMBP3Q9UFD9 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
RIMBP3Q9UFD9 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC9.89□□□□□ -0.83
RIMBP3Q9UFD9 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC9.89□□□□□ -0.83
RIMBP3Q9UFD9 MTERF4-222ENST00000614476 4524 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
RIMBP3Q9UFD9 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
RIMBP3Q9UFD9 AC012254.3-201ENST00000591183 2117 ntBASIC9.89□□□□□ -0.83
RIMBP3Q9UFD9 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC9.89□□□□□ -0.83
RIMBP3Q9UFD9 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
RIMBP3Q9UFD9 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC9.89□□□□□ -0.83
RIMBP3Q9UFD9 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms