Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC8.94□□□□□ -0.98
PTCH1Q13635 UTY-205ENST00000382896 6661 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
PTCH1Q13635 UTY-211ENST00000540140 6652 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
PTCH1Q13635 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
PTCH1Q13635 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC8.94□□□□□ -0.98
PTCH1Q13635 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
PTCH1Q13635 OR3D1P-201ENST00000438288 955 ntBASIC8.94□□□□□ -0.98
PTCH1Q13635 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC8.94□□□□□ -0.98
PTCH1Q13635 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC8.94□□□□□ -0.98
PTCH1Q13635 AC011476.1-201ENST00000466725 307 ntBASIC8.94□□□□□ -0.98
PTCH1Q13635 AC008410.1-201ENST00000483777 339 ntBASIC8.94□□□□□ -0.98
PTCH1Q13635 AC022415.1-202ENST00000486612 523 ntBASIC8.94□□□□□ -0.98
PTCH1Q13635 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC8.94□□□□□ -0.98
PTCH1Q13635 AC083906.1-201ENST00000509298 406 ntBASIC8.94□□□□□ -0.98
PTCH1Q13635 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC8.94□□□□□ -0.98
PTCH1Q13635 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC8.94□□□□□ -0.98
PTCH1Q13635 AC025171.4-201ENST00000607250 1047 ntBASIC8.94□□□□□ -0.98
PTCH1Q13635 RNA5SP440-201ENST00000612665 119 ntBASIC8.94□□□□□ -0.98
PTCH1Q13635 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
PTCH1Q13635 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
PTCH1Q13635 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
PTCH1Q13635 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
PTCH1Q13635 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC8.94□□□□□ -0.98
PTCH1Q13635 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
PTCH1Q13635 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC8.94□□□□□ -0.98
PTCH1Q13635 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC8.93□□□□□ -0.98
PTCH1Q13635 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
PTCH1Q13635 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
PTCH1Q13635 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC8.93□□□□□ -0.98
PTCH1Q13635 BTK-209ENST00000618050 2417 ntTSL 5 BASIC8.93□□□□□ -0.98
PTCH1Q13635 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC8.93□□□□□ -0.98
PTCH1Q13635 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC8.93□□□□□ -0.98
PTCH1Q13635 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC8.93□□□□□ -0.98
PTCH1Q13635 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
PTCH1Q13635 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
PTCH1Q13635 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
PTCH1Q13635 HTR2C-202ENST00000371950 4652 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
PTCH1Q13635 C20orf194-201ENST00000252032 6869 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
PTCH1Q13635 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
PTCH1Q13635 SNORA58B-201ENST00000364259 136 ntBASIC8.93□□□□□ -0.98
PTCH1Q13635 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
PTCH1Q13635 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
PTCH1Q13635 AC245047.1-201ENST00000433276 873 ntBASIC8.93□□□□□ -0.98
PTCH1Q13635 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC8.93□□□□□ -0.98
PTCH1Q13635 HIGD1AP16-201ENST00000450986 258 ntBASIC8.93□□□□□ -0.98
PTCH1Q13635 AC023141.9-201ENST00000458734 412 ntBASIC8.93□□□□□ -0.98
PTCH1Q13635 RN7SL834P-201ENST00000461450 286 ntBASIC8.93□□□□□ -0.98
PTCH1Q13635 OR2A1-AS1-202ENST00000467944 422 ntBASIC8.93□□□□□ -0.98
PTCH1Q13635 RN7SL326P-201ENST00000477493 296 ntBASIC8.93□□□□□ -0.98
PTCH1Q13635 RN7SL714P-201ENST00000487050 298 ntBASIC8.93□□□□□ -0.98
PTCH1Q13635 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC8.93□□□□□ -0.98
PTCH1Q13635 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC8.93□□□□□ -0.98
PTCH1Q13635 CR383658.1-201ENST00000514609 734 ntBASIC8.93□□□□□ -0.98
PTCH1Q13635 LINC02270-202ENST00000515691 541 ntTSL 3 BASIC8.93□□□□□ -0.98
PTCH1Q13635 MIR4700-201ENST00000578311 74 ntBASIC8.93□□□□□ -0.98
PTCH1Q13635 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC8.93□□□□□ -0.98
PTCH1Q13635 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC8.93□□□□□ -0.98
PTCH1Q13635 AL021707.7-201ENST00000607991 416 ntBASIC8.93□□□□□ -0.98
PTCH1Q13635 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC8.93□□□□□ -0.98
PTCH1Q13635 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC8.93□□□□□ -0.98
PTCH1Q13635 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
PTCH1Q13635 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
PTCH1Q13635 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
PTCH1Q13635 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
PTCH1Q13635 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
PTCH1Q13635 AC078880.4-201ENST00000617627 1749 ntBASIC8.93□□□□□ -0.98
PTCH1Q13635 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC8.93□□□□□ -0.98
PTCH1Q13635 SORBS1-211ENST00000371247 7354 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
PTCH1Q13635 OR13C1P-202ENST00000641378 2919 ntBASIC8.92□□□□□ -0.98
PTCH1Q13635 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC8.92□□□□□ -0.98
PTCH1Q13635 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC8.92□□□□□ -0.98
PTCH1Q13635 ERVV-1-201ENST00000602168 2202 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
PTCH1Q13635 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC8.92□□□□□ -0.98
PTCH1Q13635 ATG2B-202ENST00000359933 13684 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
PTCH1Q13635 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
PTCH1Q13635 PPCS-201ENST00000372556 984 ntTSL 2 BASIC8.92□□□□□ -0.98
PTCH1Q13635 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC8.92□□□□□ -0.98
PTCH1Q13635 RPS7P14-201ENST00000426405 583 ntBASIC8.92□□□□□ -0.98
PTCH1Q13635 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
PTCH1Q13635 ATP5LP2-201ENST00000440646 311 ntBASIC8.92□□□□□ -0.98
PTCH1Q13635 TSACC-207ENST00000470342 601 ntTSL 2 BASIC8.92□□□□□ -0.98
PTCH1Q13635 RN7SL717P-201ENST00000478343 297 ntBASIC8.92□□□□□ -0.98
PTCH1Q13635 AC063943.2-201ENST00000495697 534 ntBASIC8.92□□□□□ -0.98
PTCH1Q13635 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC8.92□□□□□ -0.98
PTCH1Q13635 RNA5SP434-201ENST00000516647 121 ntBASIC8.92□□□□□ -0.98
PTCH1Q13635 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC8.92□□□□□ -0.98
PTCH1Q13635 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC8.92□□□□□ -0.98
PTCH1Q13635 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC8.92□□□□□ -0.98
PTCH1Q13635 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC8.92□□□□□ -0.98
PTCH1Q13635 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
PTCH1Q13635 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
PTCH1Q13635 AC009237.12-201ENST00000604755 742 ntBASIC8.92□□□□□ -0.98
PTCH1Q13635 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
PTCH1Q13635 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
PTCH1Q13635 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
PTCH1Q13635 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC8.92□□□□□ -0.98
PTCH1Q13635 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
PTCH1Q13635 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC8.92□□□□□ -0.98
PTCH1Q13635 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
PTCH1Q13635 AP005139.1-201ENST00000580702 1647 ntBASIC8.92□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms