Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC6.98□□□□□ -1.29
HDAC4P56524 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
HDAC4P56524 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
HDAC4P56524 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
HDAC4P56524 AC009220.2-201ENST00000489759 1751 ntBASIC6.97□□□□□ -1.29
HDAC4P56524 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.97□□□□□ -1.29
HDAC4P56524 OR5M2P-202ENST00000641241 4242 ntBASIC6.97□□□□□ -1.29
HDAC4P56524 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HDAC4P56524 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
HDAC4P56524 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HDAC4P56524 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HDAC4P56524 OR2M1P-201ENST00000318104 951 ntBASIC6.97□□□□□ -1.29
HDAC4P56524 RNA5SP514-201ENST00000363717 111 ntBASIC6.97□□□□□ -1.29
HDAC4P56524 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC6.97□□□□□ -1.29
HDAC4P56524 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HDAC4P56524 RPS7P12-201ENST00000422385 582 ntBASIC6.97□□□□□ -1.29
HDAC4P56524 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC6.97□□□□□ -1.29
HDAC4P56524 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC6.97□□□□□ -1.29
HDAC4P56524 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC6.97□□□□□ -1.29
HDAC4P56524 GAPDHP20-201ENST00000444107 1007 ntBASIC6.97□□□□□ -1.29
HDAC4P56524 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HDAC4P56524 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.97□□□□□ -1.29
HDAC4P56524 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HDAC4P56524 RPL9P15-201ENST00000491096 532 ntBASIC6.97□□□□□ -1.29
HDAC4P56524 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.97□□□□□ -1.29
HDAC4P56524 AC122714.1-201ENST00000502510 459 ntBASIC6.97□□□□□ -1.29
HDAC4P56524 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC6.97□□□□□ -1.29
HDAC4P56524 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC6.97□□□□□ -1.29
HDAC4P56524 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC6.97□□□□□ -1.29
HDAC4P56524 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC6.97□□□□□ -1.29
HDAC4P56524 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.97□□□□□ -1.29
HDAC4P56524 AP000662.1-201ENST00000530952 487 ntBASIC6.97□□□□□ -1.29
HDAC4P56524 TRAV11-201ENST00000539512 339 ntBASIC6.97□□□□□ -1.29
HDAC4P56524 GNG2-203ENST00000553432 577 ntTSL 4 BASIC6.97□□□□□ -1.29
HDAC4P56524 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
HDAC4P56524 AC010287.1-201ENST00000566916 357 ntBASIC6.97□□□□□ -1.29
HDAC4P56524 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6.97□□□□□ -1.29
HDAC4P56524 MIR5095-201ENST00000578844 88 ntBASIC6.97□□□□□ -1.29
HDAC4P56524 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.97□□□□□ -1.29
HDAC4P56524 AL359704.2-201ENST00000604335 521 ntBASIC6.97□□□□□ -1.29
HDAC4P56524 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC6.97□□□□□ -1.29
HDAC4P56524 AL157762.1-201ENST00000619612 415 ntBASIC6.97□□□□□ -1.29
HDAC4P56524 AC091059.2-201ENST00000623355 614 ntBASIC6.97□□□□□ -1.29
HDAC4P56524 AC069542.2-201ENST00000624816 216 ntBASIC6.97□□□□□ -1.29
HDAC4P56524 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC6.97□□□□□ -1.29
HDAC4P56524 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.97□□□□□ -1.29
HDAC4P56524 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.97□□□□□ -1.29
HDAC4P56524 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC6.97□□□□□ -1.29
HDAC4P56524 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
HDAC4P56524 AC027559.1-201ENST00000636288 271 ntBASIC6.97□□□□□ -1.29
HDAC4P56524 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
HDAC4P56524 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.97□□□□□ -1.29
HDAC4P56524 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HDAC4P56524 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
HDAC4P56524 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
HDAC4P56524 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC6.96□□□□□ -1.29
HDAC4P56524 AL355377.1-201ENST00000621125 1653 ntBASIC6.96□□□□□ -1.29
HDAC4P56524 AL449283.1-201ENST00000602631 3403 ntBASIC6.96□□□□□ -1.3
HDAC4P56524 AL033543.1-201ENST00000623440 13454 ntBASIC6.96□□□□□ -1.3
HDAC4P56524 RBMY1A3P-201ENST00000382670 1404 ntBASIC6.96□□□□□ -1.3
HDAC4P56524 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.96□□□□□ -1.3
HDAC4P56524 MTCO1P25-201ENST00000414449 1799 ntBASIC6.96□□□□□ -1.3
HDAC4P56524 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
HDAC4P56524 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC6.96□□□□□ -1.3
HDAC4P56524 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
HDAC4P56524 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
HDAC4P56524 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
HDAC4P56524 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC6.96□□□□□ -1.3
HDAC4P56524 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
HDAC4P56524 RNU6-167P-201ENST00000384292 106 ntBASIC6.96□□□□□ -1.3
HDAC4P56524 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.96□□□□□ -1.3
HDAC4P56524 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
HDAC4P56524 NME1P1-201ENST00000420914 382 ntBASIC6.96□□□□□ -1.3
HDAC4P56524 AL672212.1-201ENST00000422246 400 ntBASIC6.96□□□□□ -1.3
HDAC4P56524 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC6.96□□□□□ -1.3
HDAC4P56524 AC083855.1-201ENST00000440041 258 ntBASIC6.96□□□□□ -1.3
HDAC4P56524 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC6.96□□□□□ -1.3
HDAC4P56524 RPS3AP49-201ENST00000472161 790 ntBASIC6.96□□□□□ -1.3
HDAC4P56524 RPL23AP68-201ENST00000480924 445 ntBASIC6.96□□□□□ -1.3
HDAC4P56524 AL079303.1-201ENST00000486611 463 ntBASIC6.96□□□□□ -1.3
HDAC4P56524 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.96□□□□□ -1.3
HDAC4P56524 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC6.96□□□□□ -1.3
HDAC4P56524 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC6.96□□□□□ -1.3
HDAC4P56524 AC022784.5-201ENST00000522241 437 ntBASIC6.96□□□□□ -1.3
HDAC4P56524 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC6.96□□□□□ -1.3
HDAC4P56524 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC6.96□□□□□ -1.3
HDAC4P56524 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC6.96□□□□□ -1.3
HDAC4P56524 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC6.96□□□□□ -1.3
HDAC4P56524 AC007671.1-201ENST00000616957 830 ntBASIC6.96□□□□□ -1.3
HDAC4P56524 UGT2B27P-201ENST00000505092 1620 ntBASIC6.96□□□□□ -1.3
HDAC4P56524 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.96□□□□□ -1.3
HDAC4P56524 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
HDAC4P56524 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
HDAC4P56524 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.96□□□□□ -1.3
HDAC4P56524 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
HDAC4P56524 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.96□□□□□ -1.3
HDAC4P56524 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
HDAC4P56524 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
HDAC4P56524 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HDAC4P56524 FO082842.1-201ENST00000423552 1370 ntBASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms