Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AC073488.11-201ENST00000633298 754 ntBASIC7.78□□□□□ -1.16
RNF144AP50876 AC017007.4-201ENST00000503353 1352 ntBASIC7.78□□□□□ -1.16
RNF144AP50876 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RNF144AP50876 ZBTB20-AS1-203ENST00000475939 1687 ntTSL 2 BASIC7.78□□□□□ -1.16
RNF144AP50876 CUL4AP1-201ENST00000514750 1863 ntBASIC7.78□□□□□ -1.16
RNF144AP50876 MAPK10-329ENST00000641555 2656 ntBASIC7.78□□□□□ -1.16
RNF144AP50876 MS4A7-202ENST00000358246 2871 ntTSL 3 BASIC7.78□□□□□ -1.16
RNF144AP50876 PGRMC2-202ENST00000394276 2858 ntTSL 2 BASIC7.78□□□□□ -1.16
RNF144AP50876 R3HCC1L-203ENST00000370584 3372 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
RNF144AP50876 XIRP2-206ENST00000409728 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
RNF144AP50876 AMPD3-204ENST00000444303 3994 ntTSL 2 BASIC7.78□□□□□ -1.16
RNF144AP50876 LINC00689-203ENST00000438049 3946 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RNF144AP50876 FPR3-201ENST00000339223 2620 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RNF144AP50876 YY1AP1-203ENST00000347088 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
RNF144AP50876 NCOA4-201ENST00000578454 2307 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RNF144AP50876 OSGEPL1-204ENST00000519810 2216 ntTSL 2 BASIC7.78□□□□□ -1.16
RNF144AP50876 AC016582.1-201ENST00000592640 1716 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RNF144AP50876 GLYATL2-201ENST00000287275 1640 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RNF144AP50876 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC7.78□□□□□ -1.16
RNF144AP50876 FMO9P-202ENST00000488458 1535 ntBASIC7.78□□□□□ -1.16
RNF144AP50876 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RNF144AP50876 SEC62-207ENST00000480708 1430 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RNF144AP50876 PHACTR2P1-201ENST00000605639 1414 ntBASIC7.78□□□□□ -1.16
RNF144AP50876 CASC19-206ENST00000641028 1430 ntBASIC7.78□□□□□ -1.16
RNF144AP50876 RPL4P3-201ENST00000428881 1311 ntBASIC7.78□□□□□ -1.16
RNF144AP50876 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
RNF144AP50876 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC7.77□□□□□ -1.16
RNF144AP50876 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.16
RNF144AP50876 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC7.77□□□□□ -1.16
RNF144AP50876 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.16
RNF144AP50876 NUP37-209ENST00000552283 2372 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
RNF144AP50876 NDE1-202ENST00000396355 3936 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RNF144AP50876 ATP13A4-201ENST00000295548 2157 ntTSL 5 BASIC7.77□□□□□ -1.17
RNF144AP50876 AC006213.1-202ENST00000589021 2176 ntTSL 2 BASIC7.77□□□□□ -1.17
RNF144AP50876 CCNT2-202ENST00000295238 4491 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
RNF144AP50876 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
RNF144AP50876 AC008537.3-201ENST00000623128 1881 ntBASIC7.77□□□□□ -1.17
RNF144AP50876 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
RNF144AP50876 DCX-201ENST00000356220 3019 ntAPPRIS ALT1 TSL 5 BASIC7.77□□□□□ -1.17
RNF144AP50876 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RNF144AP50876 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
RNF144AP50876 OR2A1-202ENST00000641044 4632 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
RNF144AP50876 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC7.77□□□□□ -1.17
RNF144AP50876 MMADHC-202ENST00000422782 1462 ntTSL 5 BASIC7.77□□□□□ -1.17
RNF144AP50876 SLC2A3P4-201ENST00000521259 1471 ntBASIC7.77□□□□□ -1.17
RNF144AP50876 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC7.77□□□□□ -1.17
RNF144AP50876 ACSL1-211ENST00000515030 3948 ntAPPRIS P3 TSL 5 BASIC7.77□□□□□ -1.17
RNF144AP50876 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
RNF144AP50876 DEFB104A-201ENST00000314265 281 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RNF144AP50876 DEFB104B-201ENST00000316169 281 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RNF144AP50876 Y_RNA.160-201ENST00000363677 92 ntBASIC7.77□□□□□ -1.17
RNF144AP50876 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
RNF144AP50876 SNORD65-201ENST00000391079 73 ntBASIC7.77□□□□□ -1.17
RNF144AP50876 VN2R17P-201ENST00000391712 832 ntBASIC7.77□□□□□ -1.17
RNF144AP50876 RPS27AP11-201ENST00000402798 447 ntBASIC7.77□□□□□ -1.17
RNF144AP50876 AC008770.1-201ENST00000406892 1257 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
RNF144AP50876 MIR1306-201ENST00000408439 85 ntBASIC7.77□□□□□ -1.17
RNF144AP50876 METTL5-204ENST00000409340 472 ntTSL 5 BASIC7.77□□□□□ -1.17
RNF144AP50876 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
RNF144AP50876 RPL23AP39-201ENST00000415533 405 ntBASIC7.77□□□□□ -1.17
RNF144AP50876 AC093580.1-201ENST00000420549 671 ntTSL 3 BASIC7.77□□□□□ -1.17
RNF144AP50876 AC146944.2-202ENST00000425529 658 ntTSL 3 BASIC7.77□□□□□ -1.17
RNF144AP50876 AC112493.1-202ENST00000436019 673 ntTSL 3 BASIC7.77□□□□□ -1.17
RNF144AP50876 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC7.77□□□□□ -1.17
RNF144AP50876 OSTCP2-201ENST00000437956 444 ntBASIC7.77□□□□□ -1.17
RNF144AP50876 ZNF341-AS1-203ENST00000443171 642 ntTSL 2 BASIC7.77□□□□□ -1.17
RNF144AP50876 AL591363.1-201ENST00000450091 483 ntBASIC7.77□□□□□ -1.17
RNF144AP50876 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC7.77□□□□□ -1.17
RNF144AP50876 ANK3-207ENST00000460468 677 ntTSL 3 BASIC7.77□□□□□ -1.17
RNF144AP50876 HMGN1P12-201ENST00000499125 195 ntBASIC7.77□□□□□ -1.17
RNF144AP50876 AC244505.1-201ENST00000502642 307 ntBASIC7.77□□□□□ -1.17
RNF144AP50876 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC7.77□□□□□ -1.17
RNF144AP50876 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC7.77□□□□□ -1.17
RNF144AP50876 HMGB1P44-201ENST00000508597 572 ntBASIC7.77□□□□□ -1.17
RNF144AP50876 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC7.77□□□□□ -1.17
RNF144AP50876 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC7.77□□□□□ -1.17
RNF144AP50876 IGLV3-7-201ENST00000522952 271 ntBASIC7.77□□□□□ -1.17
RNF144AP50876 RASSF8-AS1-204ENST00000535436 1121 ntTSL 4 BASIC7.77□□□□□ -1.17
RNF144AP50876 DHX8-202ENST00000540306 3809 ntTSL 2 BASIC7.77□□□□□ -1.17
RNF144AP50876 COX5AP2-201ENST00000554418 394 ntBASIC7.77□□□□□ -1.17
RNF144AP50876 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC7.77□□□□□ -1.17
RNF144AP50876 CIPC-206ENST00000555611 599 ntTSL 4 BASIC7.77□□□□□ -1.17
RNF144AP50876 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC7.77□□□□□ -1.17
RNF144AP50876 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC7.77□□□□□ -1.17
RNF144AP50876 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC7.77□□□□□ -1.17
RNF144AP50876 LINC02134-201ENST00000562980 557 ntTSL 5 BASIC7.77□□□□□ -1.17
RNF144AP50876 AL133457.1-201ENST00000564251 987 ntBASIC7.77□□□□□ -1.17
RNF144AP50876 AC102797.1-201ENST00000565127 545 ntTSL 4 BASIC7.77□□□□□ -1.17
RNF144AP50876 AC099684.3-201ENST00000574483 560 ntTSL 4 BASIC7.77□□□□□ -1.17
RNF144AP50876 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC7.77□□□□□ -1.17
RNF144AP50876 SRP68P1-201ENST00000584247 269 ntBASIC7.77□□□□□ -1.17
RNF144AP50876 MIR5008-201ENST00000584300 94 ntBASIC7.77□□□□□ -1.17
RNF144AP50876 AC096708.1-201ENST00000584419 658 ntBASIC7.77□□□□□ -1.17
RNF144AP50876 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC7.77□□□□□ -1.17
RNF144AP50876 AC005261.5-201ENST00000596280 355 ntBASIC7.77□□□□□ -1.17
RNF144AP50876 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC7.77□□□□□ -1.17
RNF144AP50876 AC012065.4-201ENST00000602445 679 ntBASIC7.77□□□□□ -1.17
RNF144AP50876 AL078623.1-201ENST00000602702 907 ntBASIC7.77□□□□□ -1.17
RNF144AP50876 DMKN-268ENST00000602781 827 ntAPPRIS ALT2 TSL 3 BASIC7.77□□□□□ -1.17
RNF144AP50876 FAM205C-203ENST00000603640 1017 ntAPPRIS P4 TSL 5 BASIC7.77□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms