Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RFC3P40938 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RFC3P40938 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RFC3P40938 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
RFC3P40938 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RFC3P40938 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RFC3P40938 AC110597.1-201ENST00000562669 3176 ntBASIC6.11□□□□□ -1.43
RFC3P40938 AC104837.1-201ENST00000444644 1587 ntBASIC6.11□□□□□ -1.43
RFC3P40938 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.11□□□□□ -1.43
RFC3P40938 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.11□□□□□ -1.43
RFC3P40938 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
RFC3P40938 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.11□□□□□ -1.43
RFC3P40938 RNA5SP321-201ENST00000362722 111 ntBASIC6.11□□□□□ -1.43
RFC3P40938 RNA5SP514-201ENST00000363717 111 ntBASIC6.11□□□□□ -1.43
RFC3P40938 RNU1-55P-201ENST00000365510 158 ntBASIC6.11□□□□□ -1.43
RFC3P40938 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC6.11□□□□□ -1.43
RFC3P40938 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC6.11□□□□□ -1.43
RFC3P40938 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RFC3P40938 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.11□□□□□ -1.43
RFC3P40938 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC6.11□□□□□ -1.43
RFC3P40938 RPL26P30-201ENST00000453533 435 ntBASIC6.11□□□□□ -1.43
RFC3P40938 AC019084.1-201ENST00000457337 432 ntBASIC6.11□□□□□ -1.43
RFC3P40938 AC128716.1-201ENST00000475129 166 ntBASIC6.11□□□□□ -1.43
RFC3P40938 RN7SL382P-201ENST00000482631 282 ntBASIC6.11□□□□□ -1.43
RFC3P40938 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RFC3P40938 AC093816.1-201ENST00000515076 913 ntBASIC6.11□□□□□ -1.43
RFC3P40938 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.11□□□□□ -1.43
RFC3P40938 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC6.11□□□□□ -1.43
RFC3P40938 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.11□□□□□ -1.43
RFC3P40938 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
RFC3P40938 SEC11A-209ENST00000560266 1089 ntTSL 5 BASIC6.11□□□□□ -1.43
RFC3P40938 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RFC3P40938 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.11□□□□□ -1.43
RFC3P40938 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.11□□□□□ -1.43
RFC3P40938 AC026951.2-201ENST00000613847 241 ntBASIC6.11□□□□□ -1.43
RFC3P40938 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC6.11□□□□□ -1.43
RFC3P40938 AC007159.1-201ENST00000566529 4706 ntBASIC6.11□□□□□ -1.43
RFC3P40938 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RFC3P40938 MAPK10-344ENST00000641718 3746 ntBASIC6.11□□□□□ -1.43
RFC3P40938 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
RFC3P40938 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.11□□□□□ -1.43
RFC3P40938 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC6.11□□□□□ -1.43
RFC3P40938 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RFC3P40938 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.1□□□□□ -1.43
RFC3P40938 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.1□□□□□ -1.43
RFC3P40938 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
RFC3P40938 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
RFC3P40938 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RFC3P40938 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RFC3P40938 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.1□□□□□ -1.43
RFC3P40938 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC6.1□□□□□ -1.43
RFC3P40938 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC6.1□□□□□ -1.43
RFC3P40938 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.1□□□□□ -1.43
RFC3P40938 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
RFC3P40938 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.1□□□□□ -1.43
RFC3P40938 OR6R1P-201ENST00000431838 940 ntBASIC6.1□□□□□ -1.43
RFC3P40938 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RFC3P40938 LDHAP2-201ENST00000437325 985 ntBASIC6.1□□□□□ -1.43
RFC3P40938 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC6.1□□□□□ -1.43
RFC3P40938 RARRES2P3-201ENST00000457739 473 ntBASIC6.1□□□□□ -1.43
RFC3P40938 RN7SL834P-201ENST00000461450 286 ntBASIC6.1□□□□□ -1.43
RFC3P40938 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.1□□□□□ -1.43
RFC3P40938 RN7SL413P-201ENST00000482700 297 ntBASIC6.1□□□□□ -1.43
RFC3P40938 OR9A1P-202ENST00000484361 945 ntBASIC6.1□□□□□ -1.43
RFC3P40938 RPL5P11-201ENST00000498068 893 ntBASIC6.1□□□□□ -1.43
RFC3P40938 AC021146.11-201ENST00000503319 491 ntBASIC6.1□□□□□ -1.43
RFC3P40938 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC6.1□□□□□ -1.43
RFC3P40938 AC021220.1-201ENST00000507445 630 ntBASIC6.1□□□□□ -1.43
RFC3P40938 AC112225.1-201ENST00000508230 297 ntBASIC6.1□□□□□ -1.43
RFC3P40938 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.1□□□□□ -1.43
RFC3P40938 AL445383.1-201ENST00000554689 874 ntBASIC6.1□□□□□ -1.43
RFC3P40938 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.1□□□□□ -1.43
RFC3P40938 MIR4301-201ENST00000577203 66 ntBASIC6.1□□□□□ -1.43
RFC3P40938 GTF2IP6-201ENST00000583143 541 ntBASIC6.1□□□□□ -1.43
RFC3P40938 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC6.1□□□□□ -1.43
RFC3P40938 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC6.1□□□□□ -1.43
RFC3P40938 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC6.1□□□□□ -1.43
RFC3P40938 uc_338.29-201ENST00000615099 168 ntBASIC6.1□□□□□ -1.43
RFC3P40938 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
RFC3P40938 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.1□□□□□ -1.43
RFC3P40938 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.1□□□□□ -1.43
RFC3P40938 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
RFC3P40938 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
RFC3P40938 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
RFC3P40938 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RFC3P40938 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
RFC3P40938 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.1□□□□□ -1.43
RFC3P40938 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
RFC3P40938 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RFC3P40938 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
RFC3P40938 AP005139.1-201ENST00000580702 1647 ntBASIC6.1□□□□□ -1.43
RFC3P40938 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC6.1□□□□□ -1.43
RFC3P40938 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RFC3P40938 API5P1-201ENST00000424316 1510 ntBASIC6.09□□□□□ -1.43
RFC3P40938 AC007998.4-201ENST00000612496 2533 ntBASIC6.09□□□□□ -1.43
RFC3P40938 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
RFC3P40938 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
RFC3P40938 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RFC3P40938 CXCR2-201ENST00000318507 2879 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RFC3P40938 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 258.3 ms