Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AC096661.1-201ENST00000515870 822 ntBASIC8.31□□□□□ -1.08
VARSP26640 Y_RNA.675-201ENST00000516389 149 ntBASIC8.31□□□□□ -1.08
VARSP26640 RNU6-358P-201ENST00000516564 75 ntBASIC8.31□□□□□ -1.08
VARSP26640 AC011379.2-201ENST00000523154 583 ntTSL 4 BASIC8.31□□□□□ -1.08
VARSP26640 FAM92A1P1-201ENST00000528023 890 ntBASIC8.31□□□□□ -1.08
VARSP26640 OR4C7P-201ENST00000533375 919 ntBASIC8.31□□□□□ -1.08
VARSP26640 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
VARSP26640 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC8.31□□□□□ -1.08
VARSP26640 AC016954.1-201ENST00000549976 745 ntBASIC8.31□□□□□ -1.08
VARSP26640 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC8.31□□□□□ -1.08
VARSP26640 AC005722.3-201ENST00000580884 446 ntTSL 3 BASIC8.31□□□□□ -1.08
VARSP26640 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC8.31□□□□□ -1.08
VARSP26640 AC243960.5-201ENST00000597858 255 ntBASIC8.31□□□□□ -1.08
VARSP26640 AL691432.1-202ENST00000597891 502 ntBASIC8.31□□□□□ -1.08
VARSP26640 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC8.31□□□□□ -1.08
VARSP26640 uc_338.33-201ENST00000614988 170 ntBASIC8.31□□□□□ -1.08
VARSP26640 Metazoa_SRP.176-201ENST00000619772 282 ntBASIC8.31□□□□□ -1.08
VARSP26640 AP000577.1-201ENST00000624366 878 ntBASIC8.31□□□□□ -1.08
VARSP26640 AF001550.2-201ENST00000636643 217 ntBASIC8.31□□□□□ -1.08
VARSP26640 AC112487.2-201ENST00000637950 304 ntBASIC8.31□□□□□ -1.08
VARSP26640 AC092329.4-205ENST00000638822 574 ntTSL 3 BASIC8.31□□□□□ -1.08
VARSP26640 C2orf83-204ENST00000641422 291 ntAPPRIS ALT2 BASIC8.31□□□□□ -1.08
VARSP26640 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
VARSP26640 AC106869.1-203ENST00000419035 1892 ntTSL 2 BASIC8.31□□□□□ -1.08
VARSP26640 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC8.31□□□□□ -1.08
VARSP26640 GUCY1A3-202ENST00000393832 4286 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
VARSP26640 DIS3L2-202ENST00000325385 3501 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
VARSP26640 EPS15P1-202ENST00000459691 2071 ntBASIC8.31□□□□□ -1.08
VARSP26640 ZNF667-206ENST00000591790 5250 ntTSL 2 BASIC8.31□□□□□ -1.08
VARSP26640 ARMC3-204ENST00000409983 2779 ntAPPRIS ALT2 TSL 2 BASIC8.31□□□□□ -1.08
VARSP26640 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
VARSP26640 FGL1-203ENST00000398054 1462 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
VARSP26640 ALG8-221ENST00000615266 1469 ntTSL 5 BASIC8.31□□□□□ -1.08
VARSP26640 ABCB1-211ENST00000622132 4778 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
VARSP26640 FAM205BP-202ENST00000399773 4009 ntBASIC8.31□□□□□ -1.08
VARSP26640 DNAJC5G-202ENST00000402462 1904 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
VARSP26640 TRAF6P1-201ENST00000429404 1558 ntBASIC8.31□□□□□ -1.08
VARSP26640 GTF2H1-201ENST00000265963 2982 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
VARSP26640 PUM1-204ENST00000373747 5375 ntAPPRIS ALT1 TSL 5 BASIC8.3□□□□□ -1.08
VARSP26640 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC8.3□□□□□ -1.08
VARSP26640 OR10AB1P-202ENST00000641219 1686 ntBASIC8.3□□□□□ -1.08
VARSP26640 TCL6-201ENST00000352367 3398 ntTSL 2 BASIC8.3□□□□□ -1.08
VARSP26640 GPR156-201ENST00000315843 4193 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
VARSP26640 PTPRB-209ENST00000550857 5839 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
VARSP26640 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
VARSP26640 CACNB4-239ENST00000636947 5575 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
VARSP26640 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC8.3□□□□□ -1.08
VARSP26640 ZNF225-206ENST00000592780 2538 ntTSL 5 BASIC8.3□□□□□ -1.08
VARSP26640 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
VARSP26640 MXRA7-207ENST00000592148 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
VARSP26640 USP3-208ENST00000558285 1742 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
VARSP26640 MSL3-203ENST00000361672 2256 ntTSL 2 BASIC8.3□□□□□ -1.08
VARSP26640 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
VARSP26640 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
VARSP26640 PRYP4-201ENST00000306589 444 ntBASIC8.3□□□□□ -1.08
VARSP26640 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
VARSP26640 Y_RNA.18-201ENST00000362461 102 ntBASIC8.3□□□□□ -1.08
VARSP26640 Y_RNA.372-201ENST00000365599 102 ntBASIC8.3□□□□□ -1.08
VARSP26640 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
VARSP26640 TPT1P2-201ENST00000413105 503 ntBASIC8.3□□□□□ -1.08
VARSP26640 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
VARSP26640 AL157698.1-201ENST00000415190 1011 ntBASIC8.3□□□□□ -1.08
VARSP26640 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC8.3□□□□□ -1.08
VARSP26640 RPSAP8-201ENST00000429844 889 ntBASIC8.3□□□□□ -1.08
VARSP26640 LINC00160-201ENST00000430635 693 ntTSL 5 BASIC8.3□□□□□ -1.08
VARSP26640 AC019055.1-201ENST00000432822 443 ntTSL 3 BASIC8.3□□□□□ -1.08
VARSP26640 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC8.3□□□□□ -1.08
VARSP26640 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
VARSP26640 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC8.3□□□□□ -1.08
VARSP26640 MTND4LP10-201ENST00000435146 291 ntBASIC8.3□□□□□ -1.08
VARSP26640 AL122003.1-201ENST00000435206 784 ntBASIC8.3□□□□□ -1.08
VARSP26640 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC8.3□□□□□ -1.08
VARSP26640 AC005099.1-201ENST00000442083 610 ntBASIC8.3□□□□□ -1.08
VARSP26640 AL158214.1-201ENST00000444423 404 ntBASIC8.3□□□□□ -1.08
VARSP26640 RPL7P36-201ENST00000444633 681 ntBASIC8.3□□□□□ -1.08
VARSP26640 AC090954.1-201ENST00000445502 361 ntBASIC8.3□□□□□ -1.08
VARSP26640 CASK-AS1-201ENST00000451126 515 ntTSL 2 BASIC8.3□□□□□ -1.08
VARSP26640 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC8.3□□□□□ -1.08
VARSP26640 PGBD4P1-201ENST00000473644 407 ntBASIC8.3□□□□□ -1.08
VARSP26640 IGKV1-16-201ENST00000479981 378 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
VARSP26640 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC8.3□□□□□ -1.08
VARSP26640 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
VARSP26640 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC8.3□□□□□ -1.08
VARSP26640 TCEA1-204ENST00000518784 586 ntTSL 2 BASIC8.3□□□□□ -1.08
VARSP26640 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC8.3□□□□□ -1.08
VARSP26640 OR4C9P-201ENST00000532368 925 ntBASIC8.3□□□□□ -1.08
VARSP26640 AC125611.2-201ENST00000551907 647 ntBASIC8.3□□□□□ -1.08
VARSP26640 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC8.3□□□□□ -1.08
VARSP26640 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC8.3□□□□□ -1.08
VARSP26640 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC8.3□□□□□ -1.08
VARSP26640 AC087639.1-201ENST00000560974 920 ntBASIC8.3□□□□□ -1.08
VARSP26640 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC8.3□□□□□ -1.08
VARSP26640 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC8.3□□□□□ -1.08
VARSP26640 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC8.3□□□□□ -1.08
VARSP26640 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC8.3□□□□□ -1.08
VARSP26640 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC8.3□□□□□ -1.08
VARSP26640 AC063977.5-201ENST00000601044 974 ntBASIC8.3□□□□□ -1.08
VARSP26640 SUMO2P14-201ENST00000604488 293 ntBASIC8.3□□□□□ -1.08
VARSP26640 IGKV3OR2-5-201ENST00000605851 281 ntBASIC8.3□□□□□ -1.08
VARSP26640 PRYP3-202ENST00000607210 444 ntBASIC8.3□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms