Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
PCDHGB4Q9UN71 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGB4Q9UN71 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
PCDHGB4Q9UN71 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGB4Q9UN71 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGB4Q9UN71 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGB4Q9UN71 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGB4Q9UN71 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.18■□□□□ 0.66
PCDHGB4Q9UN71 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGB4Q9UN71 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGB4Q9UN71 PGM5P4-201ENST00000421970 445 ntBASIC19.18■□□□□ 0.66
PCDHGB4Q9UN71 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDHGB4Q9UN71 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGB4Q9UN71 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PCDHGB4Q9UN71 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PCDHGB4Q9UN71 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGB4Q9UN71 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGB4Q9UN71 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
PCDHGB4Q9UN71 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
PCDHGB4Q9UN71 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PCDHGB4Q9UN71 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGB4Q9UN71 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGB4Q9UN71 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGB4Q9UN71 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGB4Q9UN71 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGB4Q9UN71 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.17■□□□□ 0.66
PCDHGB4Q9UN71 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGB4Q9UN71 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
PCDHGB4Q9UN71 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGB4Q9UN71 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGB4Q9UN71 AC097381.1-201ENST00000429019 1296 ntBASIC19.17■□□□□ 0.66
PCDHGB4Q9UN71 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.17■□□□□ 0.66
PCDHGB4Q9UN71 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGB4Q9UN71 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
PCDHGB4Q9UN71 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
PCDHGB4Q9UN71 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.17■□□□□ 0.66
PCDHGB4Q9UN71 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.17■□□□□ 0.66
PCDHGB4Q9UN71 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGB4Q9UN71 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDHGB4Q9UN71 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
PCDHGB4Q9UN71 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGB4Q9UN71 KRT8P36-201ENST00000489121 1440 ntBASIC19.17■□□□□ 0.66
PCDHGB4Q9UN71 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
PCDHGB4Q9UN71 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGB4Q9UN71 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.16■□□□□ 0.66
PCDHGB4Q9UN71 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PCDHGB4Q9UN71 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGB4Q9UN71 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
PCDHGB4Q9UN71 AC007613.1-201ENST00000572811 2597 ntBASIC19.16■□□□□ 0.66
PCDHGB4Q9UN71 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGB4Q9UN71 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PCDHGB4Q9UN71 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
PCDHGB4Q9UN71 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.16■□□□□ 0.66
PCDHGB4Q9UN71 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGB4Q9UN71 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGB4Q9UN71 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.16■□□□□ 0.66
PCDHGB4Q9UN71 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.16■□□□□ 0.66
PCDHGB4Q9UN71 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGB4Q9UN71 UBE2DNL-204ENST00000602536 740 ntBASIC19.16■□□□□ 0.66
PCDHGB4Q9UN71 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
PCDHGB4Q9UN71 MYCNOS-205ENST00000641950 531 ntBASIC19.16■□□□□ 0.66
PCDHGB4Q9UN71 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.16■□□□□ 0.66
PCDHGB4Q9UN71 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGB4Q9UN71 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGB4Q9UN71 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGB4Q9UN71 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGB4Q9UN71 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
PCDHGB4Q9UN71 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PCDHGB4Q9UN71 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.16■□□□□ 0.66
PCDHGB4Q9UN71 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDHGB4Q9UN71 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDHGB4Q9UN71 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGB4Q9UN71 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.15■□□□□ 0.66
PCDHGB4Q9UN71 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGB4Q9UN71 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGB4Q9UN71 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGB4Q9UN71 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGB4Q9UN71 AC005082.1-201ENST00000413042 2259 ntBASIC19.15■□□□□ 0.66
PCDHGB4Q9UN71 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGB4Q9UN71 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGB4Q9UN71 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
PCDHGB4Q9UN71 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.15■□□□□ 0.66
PCDHGB4Q9UN71 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PCDHGB4Q9UN71 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDHGB4Q9UN71 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PCDHGB4Q9UN71 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGB4Q9UN71 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGB4Q9UN71 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGB4Q9UN71 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGB4Q9UN71 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGB4Q9UN71 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGB4Q9UN71 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDHGB4Q9UN71 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGB4Q9UN71 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGB4Q9UN71 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGB4Q9UN71 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.14■□□□□ 0.66
PCDHGB4Q9UN71 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.14■□□□□ 0.66
PCDHGB4Q9UN71 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
PCDHGB4Q9UN71 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
PCDHGB4Q9UN71 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms