Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SH2D4AQ9H788 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC23.18■■□□□ 1.3
SH2D4AQ9H788 FAM197Y1-201ENST00000421178 764 ntBASIC23.18■■□□□ 1.3
SH2D4AQ9H788 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC23.18■■□□□ 1.3
SH2D4AQ9H788 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC23.18■■□□□ 1.3
SH2D4AQ9H788 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC23.18■■□□□ 1.3
SH2D4AQ9H788 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC23.18■■□□□ 1.3
SH2D4AQ9H788 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SH2D4AQ9H788 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC23.17■■□□□ 1.3
SH2D4AQ9H788 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
SH2D4AQ9H788 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC23.17■■□□□ 1.3
SH2D4AQ9H788 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
SH2D4AQ9H788 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SH2D4AQ9H788 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SH2D4AQ9H788 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC23.17■■□□□ 1.3
SH2D4AQ9H788 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
SH2D4AQ9H788 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
SH2D4AQ9H788 DECR2-212ENST00000627716 352 ntTSL 2 BASIC23.17■■□□□ 1.3
SH2D4AQ9H788 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC23.17■■□□□ 1.3
SH2D4AQ9H788 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
SH2D4AQ9H788 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SH2D4AQ9H788 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC23.17■■□□□ 1.3
SH2D4AQ9H788 AP006587.1-201ENST00000534129 1502 ntBASIC23.17■■□□□ 1.3
SH2D4AQ9H788 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SH2D4AQ9H788 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
SH2D4AQ9H788 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SH2D4AQ9H788 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SH2D4AQ9H788 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC23.17■■□□□ 1.3
SH2D4AQ9H788 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC23.16■■□□□ 1.3
SH2D4AQ9H788 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
SH2D4AQ9H788 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SH2D4AQ9H788 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SH2D4AQ9H788 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SH2D4AQ9H788 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC23.16■■□□□ 1.3
SH2D4AQ9H788 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC23.16■■□□□ 1.3
SH2D4AQ9H788 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SH2D4AQ9H788 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SH2D4AQ9H788 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SH2D4AQ9H788 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SH2D4AQ9H788 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC23.16■■□□□ 1.3
SH2D4AQ9H788 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SH2D4AQ9H788 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC23.15■■□□□ 1.3
SH2D4AQ9H788 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
SH2D4AQ9H788 AC116351.2-201ENST00000606540 1585 ntBASIC23.15■■□□□ 1.3
SH2D4AQ9H788 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC23.15■■□□□ 1.3
SH2D4AQ9H788 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC23.15■■□□□ 1.3
SH2D4AQ9H788 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC23.15■■□□□ 1.3
SH2D4AQ9H788 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SH2D4AQ9H788 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SH2D4AQ9H788 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SH2D4AQ9H788 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC23.15■■□□□ 1.3
SH2D4AQ9H788 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SH2D4AQ9H788 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SH2D4AQ9H788 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
SH2D4AQ9H788 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
SH2D4AQ9H788 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SH2D4AQ9H788 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
SH2D4AQ9H788 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
SH2D4AQ9H788 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SH2D4AQ9H788 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SH2D4AQ9H788 KSR1P1-201ENST00000446298 240 ntBASIC23.14■■□□□ 1.29
SH2D4AQ9H788 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SH2D4AQ9H788 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SH2D4AQ9H788 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC23.14■■□□□ 1.29
SH2D4AQ9H788 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC23.14■■□□□ 1.29
SH2D4AQ9H788 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
SH2D4AQ9H788 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SH2D4AQ9H788 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC23.14■■□□□ 1.29
SH2D4AQ9H788 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC23.14■■□□□ 1.29
SH2D4AQ9H788 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
SH2D4AQ9H788 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC23.13■■□□□ 1.29
SH2D4AQ9H788 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SH2D4AQ9H788 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
SH2D4AQ9H788 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.13■■□□□ 1.29
SH2D4AQ9H788 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
SH2D4AQ9H788 AC087499.1-201ENST00000418141 1075 ntBASIC23.13■■□□□ 1.29
SH2D4AQ9H788 NIFKP9-201ENST00000419265 221 ntBASIC23.13■■□□□ 1.29
SH2D4AQ9H788 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.13■■□□□ 1.29
SH2D4AQ9H788 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC23.13■■□□□ 1.29
SH2D4AQ9H788 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.13■■□□□ 1.29
SH2D4AQ9H788 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC23.13■■□□□ 1.29
SH2D4AQ9H788 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC23.13■■□□□ 1.29
SH2D4AQ9H788 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
SH2D4AQ9H788 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SH2D4AQ9H788 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SH2D4AQ9H788 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SH2D4AQ9H788 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC23.12■■□□□ 1.29
SH2D4AQ9H788 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC23.12■■□□□ 1.29
SH2D4AQ9H788 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SH2D4AQ9H788 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC23.12■■□□□ 1.29
SH2D4AQ9H788 TSPY15P-201ENST00000457163 923 ntBASIC23.12■■□□□ 1.29
SH2D4AQ9H788 NUDT16P1-203ENST00000513809 620 ntBASIC23.12■■□□□ 1.29
SH2D4AQ9H788 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC23.12■■□□□ 1.29
SH2D4AQ9H788 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
SH2D4AQ9H788 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
SH2D4AQ9H788 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC23.11■■□□□ 1.29
SH2D4AQ9H788 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
SH2D4AQ9H788 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC23.11■■□□□ 1.29
SH2D4AQ9H788 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SH2D4AQ9H788 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC23.11■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms