Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NUCKS1Q9H1E3 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.49■■□□□ 1.03
NUCKS1Q9H1E3 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
NUCKS1Q9H1E3 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NUCKS1Q9H1E3 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
NUCKS1Q9H1E3 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
NUCKS1Q9H1E3 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NUCKS1Q9H1E3 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NUCKS1Q9H1E3 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NUCKS1Q9H1E3 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NUCKS1Q9H1E3 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NUCKS1Q9H1E3 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
NUCKS1Q9H1E3 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NUCKS1Q9H1E3 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.48■■□□□ 1.03
NUCKS1Q9H1E3 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
NUCKS1Q9H1E3 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
NUCKS1Q9H1E3 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
NUCKS1Q9H1E3 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NUCKS1Q9H1E3 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.48■■□□□ 1.03
NUCKS1Q9H1E3 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
NUCKS1Q9H1E3 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NUCKS1Q9H1E3 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NUCKS1Q9H1E3 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
NUCKS1Q9H1E3 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.48■■□□□ 1.03
NUCKS1Q9H1E3 AC105020.6-201ENST00000621523 1217 ntBASIC21.48■■□□□ 1.03
NUCKS1Q9H1E3 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NUCKS1Q9H1E3 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
NUCKS1Q9H1E3 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NUCKS1Q9H1E3 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
NUCKS1Q9H1E3 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NUCKS1Q9H1E3 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
NUCKS1Q9H1E3 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NUCKS1Q9H1E3 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
NUCKS1Q9H1E3 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NUCKS1Q9H1E3 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NUCKS1Q9H1E3 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.47■■□□□ 1.03
NUCKS1Q9H1E3 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NUCKS1Q9H1E3 GPX1P1-201ENST00000388829 606 ntBASIC21.47■■□□□ 1.03
NUCKS1Q9H1E3 KRT18P68-201ENST00000392293 1000 ntBASIC21.47■■□□□ 1.03
NUCKS1Q9H1E3 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NUCKS1Q9H1E3 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
NUCKS1Q9H1E3 AC083906.2-201ENST00000511578 360 ntBASIC21.47■■□□□ 1.03
NUCKS1Q9H1E3 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NUCKS1Q9H1E3 AC104771.1-201ENST00000603335 964 ntBASIC21.47■■□□□ 1.03
NUCKS1Q9H1E3 AL121832.2-201ENST00000610979 668 ntBASIC21.47■■□□□ 1.03
NUCKS1Q9H1E3 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.47■■□□□ 1.03
NUCKS1Q9H1E3 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.47■■□□□ 1.03
NUCKS1Q9H1E3 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
NUCKS1Q9H1E3 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NUCKS1Q9H1E3 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NUCKS1Q9H1E3 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
NUCKS1Q9H1E3 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.47■■□□□ 1.03
NUCKS1Q9H1E3 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
NUCKS1Q9H1E3 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.47■■□□□ 1.03
NUCKS1Q9H1E3 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC21.47■■□□□ 1.03
NUCKS1Q9H1E3 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21.47■■□□□ 1.03
NUCKS1Q9H1E3 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NUCKS1Q9H1E3 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NUCKS1Q9H1E3 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NUCKS1Q9H1E3 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.46■■□□□ 1.03
NUCKS1Q9H1E3 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NUCKS1Q9H1E3 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.46■■□□□ 1.03
NUCKS1Q9H1E3 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.46■■□□□ 1.03
NUCKS1Q9H1E3 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.46■■□□□ 1.03
NUCKS1Q9H1E3 AL109923.1-201ENST00000618799 583 ntBASIC21.46■■□□□ 1.03
NUCKS1Q9H1E3 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
NUCKS1Q9H1E3 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NUCKS1Q9H1E3 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
NUCKS1Q9H1E3 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NUCKS1Q9H1E3 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NUCKS1Q9H1E3 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
NUCKS1Q9H1E3 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.46■■□□□ 1.03
NUCKS1Q9H1E3 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC21.46■■□□□ 1.03
NUCKS1Q9H1E3 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
NUCKS1Q9H1E3 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.46■■□□□ 1.03
NUCKS1Q9H1E3 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.46■■□□□ 1.03
NUCKS1Q9H1E3 AC093484.2-201ENST00000580996 2166 ntBASIC21.46■■□□□ 1.03
NUCKS1Q9H1E3 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NUCKS1Q9H1E3 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.03
NUCKS1Q9H1E3 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
NUCKS1Q9H1E3 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NUCKS1Q9H1E3 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NUCKS1Q9H1E3 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC21.45■■□□□ 1.02
NUCKS1Q9H1E3 HLA-G-202ENST00000376815 851 ntBASIC21.45■■□□□ 1.02
NUCKS1Q9H1E3 HLA-G-203ENST00000376818 1127 ntBASIC21.45■■□□□ 1.02
NUCKS1Q9H1E3 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.45■■□□□ 1.02
NUCKS1Q9H1E3 GUSBP6-202ENST00000438529 1198 ntBASIC21.45■■□□□ 1.02
NUCKS1Q9H1E3 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.45■■□□□ 1.02
NUCKS1Q9H1E3 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.45■■□□□ 1.02
NUCKS1Q9H1E3 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
NUCKS1Q9H1E3 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NUCKS1Q9H1E3 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NUCKS1Q9H1E3 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NUCKS1Q9H1E3 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC21.45■■□□□ 1.02
NUCKS1Q9H1E3 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NUCKS1Q9H1E3 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
NUCKS1Q9H1E3 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NUCKS1Q9H1E3 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC21.45■■□□□ 1.02
NUCKS1Q9H1E3 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.45■■□□□ 1.02
NUCKS1Q9H1E3 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms