Protein–RNA interactions for Protein: Q9BT78

COPS4, COP9 signalosome complex subunit 4, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4Q9BT78 AC123595.1-201ENST00000440769 1046 ntBASIC18.15■□□□□ 0.5
COPS4Q9BT78 YBX1P1-201ENST00000445822 960 ntBASIC18.15■□□□□ 0.5
COPS4Q9BT78 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.15■□□□□ 0.5
COPS4Q9BT78 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.15■□□□□ 0.5
COPS4Q9BT78 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.15■□□□□ 0.5
COPS4Q9BT78 RARRES2P11-201ENST00000635158 484 ntBASIC18.15■□□□□ 0.5
COPS4Q9BT78 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.15■□□□□ 0.5
COPS4Q9BT78 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COPS4Q9BT78 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
COPS4Q9BT78 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
COPS4Q9BT78 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.14■□□□□ 0.5
COPS4Q9BT78 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.14■□□□□ 0.5
COPS4Q9BT78 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.14■□□□□ 0.5
COPS4Q9BT78 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.14■□□□□ 0.5
COPS4Q9BT78 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
COPS4Q9BT78 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
COPS4Q9BT78 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
COPS4Q9BT78 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
COPS4Q9BT78 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
COPS4Q9BT78 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.14■□□□□ 0.49
COPS4Q9BT78 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COPS4Q9BT78 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COPS4Q9BT78 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
COPS4Q9BT78 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COPS4Q9BT78 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COPS4Q9BT78 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COPS4Q9BT78 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.14■□□□□ 0.49
COPS4Q9BT78 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.14■□□□□ 0.49
COPS4Q9BT78 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.14■□□□□ 0.49
COPS4Q9BT78 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COPS4Q9BT78 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
COPS4Q9BT78 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.14■□□□□ 0.49
COPS4Q9BT78 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.14■□□□□ 0.49
COPS4Q9BT78 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COPS4Q9BT78 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.14■□□□□ 0.49
COPS4Q9BT78 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COPS4Q9BT78 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
COPS4Q9BT78 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COPS4Q9BT78 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
COPS4Q9BT78 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
COPS4Q9BT78 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.13■□□□□ 0.49
COPS4Q9BT78 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
COPS4Q9BT78 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
COPS4Q9BT78 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COPS4Q9BT78 AC245052.3-201ENST00000450182 901 ntBASIC18.13■□□□□ 0.49
COPS4Q9BT78 AC010141.2-201ENST00000452426 721 ntBASIC18.13■□□□□ 0.49
COPS4Q9BT78 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.13■□□□□ 0.49
COPS4Q9BT78 DUX4L2-201ENST00000561772 1275 ntBASIC18.13■□□□□ 0.49
COPS4Q9BT78 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.13■□□□□ 0.49
COPS4Q9BT78 DUX4L6-201ENST00000626483 1275 ntBASIC18.13■□□□□ 0.49
COPS4Q9BT78 DUX4L1-201ENST00000627662 1275 ntBASIC18.13■□□□□ 0.49
COPS4Q9BT78 DUX4L8-201ENST00000629013 1275 ntBASIC18.13■□□□□ 0.49
COPS4Q9BT78 DUX4L3-201ENST00000630187 1275 ntBASIC18.13■□□□□ 0.49
COPS4Q9BT78 DUX4L7-201ENST00000630678 1275 ntBASIC18.13■□□□□ 0.49
COPS4Q9BT78 DUX4L5-201ENST00000630834 1275 ntBASIC18.13■□□□□ 0.49
COPS4Q9BT78 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COPS4Q9BT78 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COPS4Q9BT78 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
COPS4Q9BT78 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COPS4Q9BT78 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
COPS4Q9BT78 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COPS4Q9BT78 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.13■□□□□ 0.49
COPS4Q9BT78 KRT16P2-201ENST00000414673 1423 ntBASIC18.13■□□□□ 0.49
COPS4Q9BT78 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.13■□□□□ 0.49
COPS4Q9BT78 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
COPS4Q9BT78 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COPS4Q9BT78 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.13■□□□□ 0.49
COPS4Q9BT78 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
COPS4Q9BT78 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
COPS4Q9BT78 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
COPS4Q9BT78 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COPS4Q9BT78 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COPS4Q9BT78 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COPS4Q9BT78 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COPS4Q9BT78 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COPS4Q9BT78 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COPS4Q9BT78 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.12■□□□□ 0.49
COPS4Q9BT78 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.12■□□□□ 0.49
COPS4Q9BT78 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.12■□□□□ 0.49
COPS4Q9BT78 AC104187.1-201ENST00000607510 612 ntBASIC18.12■□□□□ 0.49
COPS4Q9BT78 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.12■□□□□ 0.49
COPS4Q9BT78 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.12■□□□□ 0.49
COPS4Q9BT78 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.12■□□□□ 0.49
COPS4Q9BT78 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COPS4Q9BT78 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.12■□□□□ 0.49
COPS4Q9BT78 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.12■□□□□ 0.49
COPS4Q9BT78 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
COPS4Q9BT78 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.12■□□□□ 0.49
COPS4Q9BT78 AC116050.2-201ENST00000612102 1779 ntBASIC18.12■□□□□ 0.49
COPS4Q9BT78 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.12■□□□□ 0.49
COPS4Q9BT78 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.12■□□□□ 0.49
COPS4Q9BT78 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
COPS4Q9BT78 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COPS4Q9BT78 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COPS4Q9BT78 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COPS4Q9BT78 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COPS4Q9BT78 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
COPS4Q9BT78 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COPS4Q9BT78 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.11■□□□□ 0.49
COPS4Q9BT78 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms