Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 MOK-208ENST00000519058 917 ntTSL 2 BASIC6.12□□□□□ -1.43
HMCN1Q96RW7 AP000867.3-201ENST00000524675 377 ntBASIC6.12□□□□□ -1.43
HMCN1Q96RW7 AL121772.3-201ENST00000610840 674 ntBASIC6.12□□□□□ -1.43
HMCN1Q96RW7 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HMCN1Q96RW7 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC6.12□□□□□ -1.43
HMCN1Q96RW7 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC6.12□□□□□ -1.43
HMCN1Q96RW7 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC6.12□□□□□ -1.43
HMCN1Q96RW7 STK25-205ENST00000405883 1904 ntTSL 2 BASIC6.12□□□□□ -1.43
HMCN1Q96RW7 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC6.12□□□□□ -1.43
HMCN1Q96RW7 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HMCN1Q96RW7 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
HMCN1Q96RW7 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC6.12□□□□□ -1.43
HMCN1Q96RW7 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HMCN1Q96RW7 LBH-204ENST00000406087 559 ntTSL 4 BASIC6.12□□□□□ -1.43
HMCN1Q96RW7 AL031284.1-201ENST00000419297 478 ntBASIC6.12□□□□□ -1.43
HMCN1Q96RW7 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HMCN1Q96RW7 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC6.12□□□□□ -1.43
HMCN1Q96RW7 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HMCN1Q96RW7 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC6.12□□□□□ -1.43
HMCN1Q96RW7 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC6.12□□□□□ -1.43
HMCN1Q96RW7 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC6.12□□□□□ -1.43
HMCN1Q96RW7 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
HMCN1Q96RW7 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HMCN1Q96RW7 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HMCN1Q96RW7 RCC2P6-201ENST00000526625 1557 ntBASIC6.11□□□□□ -1.43
HMCN1Q96RW7 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
HMCN1Q96RW7 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC6.11□□□□□ -1.43
HMCN1Q96RW7 BCRP1-201ENST00000444246 691 ntBASIC6.11□□□□□ -1.43
HMCN1Q96RW7 YBX1P10-201ENST00000444752 975 ntBASIC6.11□□□□□ -1.43
HMCN1Q96RW7 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC6.11□□□□□ -1.43
HMCN1Q96RW7 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC6.11□□□□□ -1.43
HMCN1Q96RW7 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HMCN1Q96RW7 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC6.11□□□□□ -1.43
HMCN1Q96RW7 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
HMCN1Q96RW7 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
HMCN1Q96RW7 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HMCN1Q96RW7 AP000523.1-201ENST00000398242 1049 ntBASIC6.11□□□□□ -1.43
HMCN1Q96RW7 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC6.11□□□□□ -1.43
HMCN1Q96RW7 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC6.11□□□□□ -1.43
HMCN1Q96RW7 CYGB-204ENST00000589342 815 ntTSL 3 BASIC6.11□□□□□ -1.43
HMCN1Q96RW7 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC6.11□□□□□ -1.43
HMCN1Q96RW7 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC6.11□□□□□ -1.43
HMCN1Q96RW7 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HMCN1Q96RW7 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
HMCN1Q96RW7 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HMCN1Q96RW7 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HMCN1Q96RW7 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
HMCN1Q96RW7 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
HMCN1Q96RW7 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HMCN1Q96RW7 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC6.11□□□□□ -1.43
HMCN1Q96RW7 METTL26-204ENST00000397665 558 ntTSL 2 BASIC6.11□□□□□ -1.43
HMCN1Q96RW7 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
HMCN1Q96RW7 AC079089.2-201ENST00000531211 1277 ntBASIC6.11□□□□□ -1.43
HMCN1Q96RW7 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC6.11□□□□□ -1.43
HMCN1Q96RW7 IGHV3OR16-7-201ENST00000604106 360 ntBASIC6.11□□□□□ -1.43
HMCN1Q96RW7 AL773604.1-201ENST00000617417 272 ntBASIC6.11□□□□□ -1.43
HMCN1Q96RW7 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HMCN1Q96RW7 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
HMCN1Q96RW7 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HMCN1Q96RW7 RNPS1P1-201ENST00000507437 918 ntBASIC6.11□□□□□ -1.43
HMCN1Q96RW7 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
HMCN1Q96RW7 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HMCN1Q96RW7 AL353801.3-201ENST00000609898 542 ntBASIC6.11□□□□□ -1.43
HMCN1Q96RW7 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC6.11□□□□□ -1.43
HMCN1Q96RW7 SERF2-217ENST00000630046 862 ntTSL 5 BASIC6.11□□□□□ -1.43
HMCN1Q96RW7 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC6.11□□□□□ -1.43
HMCN1Q96RW7 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HMCN1Q96RW7 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HMCN1Q96RW7 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HMCN1Q96RW7 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 UPF3AP3-201ENST00000420996 769 ntBASIC6.1□□□□□ -1.43
HMCN1Q96RW7 TSSC2-201ENST00000450217 709 ntBASIC6.1□□□□□ -1.43
HMCN1Q96RW7 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 AP001005.1-201ENST00000571755 1248 ntBASIC6.1□□□□□ -1.43
HMCN1Q96RW7 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC6.1□□□□□ -1.43
HMCN1Q96RW7 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 AC004980.1-204ENST00000429707 299 ntBASIC6.1□□□□□ -1.43
HMCN1Q96RW7 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms