Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
USP6NLQ92738 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
USP6NLQ92738 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC22.54■■□□□ 1.2
USP6NLQ92738 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
USP6NLQ92738 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
USP6NLQ92738 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC22.54■■□□□ 1.2
USP6NLQ92738 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
USP6NLQ92738 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC22.54■■□□□ 1.2
USP6NLQ92738 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
USP6NLQ92738 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
USP6NLQ92738 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
USP6NLQ92738 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
USP6NLQ92738 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
USP6NLQ92738 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC22.54■■□□□ 1.2
USP6NLQ92738 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
USP6NLQ92738 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
USP6NLQ92738 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
USP6NLQ92738 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
USP6NLQ92738 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC22.54■■□□□ 1.2
USP6NLQ92738 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
USP6NLQ92738 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC22.53■■□□□ 1.2
USP6NLQ92738 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
USP6NLQ92738 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
USP6NLQ92738 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
USP6NLQ92738 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC22.53■■□□□ 1.2
USP6NLQ92738 LIN28AP1-201ENST00000429574 405 ntBASIC22.53■■□□□ 1.2
USP6NLQ92738 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
USP6NLQ92738 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC22.53■■□□□ 1.2
USP6NLQ92738 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC22.53■■□□□ 1.2
USP6NLQ92738 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC22.53■■□□□ 1.2
USP6NLQ92738 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
USP6NLQ92738 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
USP6NLQ92738 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
USP6NLQ92738 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
USP6NLQ92738 STK25-204ENST00000405585 1643 ntTSL 2 BASIC22.53■■□□□ 1.2
USP6NLQ92738 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC22.53■■□□□ 1.2
USP6NLQ92738 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC22.53■■□□□ 1.2
USP6NLQ92738 AL121603.2-201ENST00000557373 2117 ntBASIC22.52■■□□□ 1.2
USP6NLQ92738 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
USP6NLQ92738 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
USP6NLQ92738 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
USP6NLQ92738 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
USP6NLQ92738 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC22.52■■□□□ 1.2
USP6NLQ92738 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
USP6NLQ92738 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC22.52■■□□□ 1.2
USP6NLQ92738 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
USP6NLQ92738 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
USP6NLQ92738 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
USP6NLQ92738 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC22.52■■□□□ 1.2
USP6NLQ92738 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
USP6NLQ92738 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.19
USP6NLQ92738 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC22.51■■□□□ 1.19
USP6NLQ92738 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
USP6NLQ92738 AL024507.2-201ENST00000606070 2574 ntBASIC22.51■■□□□ 1.19
USP6NLQ92738 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
USP6NLQ92738 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC22.51■■□□□ 1.19
USP6NLQ92738 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
USP6NLQ92738 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
USP6NLQ92738 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
USP6NLQ92738 ATP5G1P1-201ENST00000448724 379 ntBASIC22.51■■□□□ 1.19
USP6NLQ92738 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
USP6NLQ92738 AC097488.1-201ENST00000507834 756 ntBASIC22.51■■□□□ 1.19
USP6NLQ92738 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
USP6NLQ92738 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC22.51■■□□□ 1.19
USP6NLQ92738 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
USP6NLQ92738 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
USP6NLQ92738 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
USP6NLQ92738 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
USP6NLQ92738 TFP1-202ENST00000475455 1573 ntBASIC22.5■■□□□ 1.19
USP6NLQ92738 AC116351.2-201ENST00000606540 1585 ntBASIC22.5■■□□□ 1.19
USP6NLQ92738 MYB-221ENST00000527615 2381 ntTSL 5 BASIC22.5■■□□□ 1.19
USP6NLQ92738 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
USP6NLQ92738 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
USP6NLQ92738 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC22.5■■□□□ 1.19
USP6NLQ92738 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC22.5■■□□□ 1.19
USP6NLQ92738 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
USP6NLQ92738 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC22.5■■□□□ 1.19
USP6NLQ92738 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC22.5■■□□□ 1.19
USP6NLQ92738 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
USP6NLQ92738 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
USP6NLQ92738 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
USP6NLQ92738 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
USP6NLQ92738 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC22.5■■□□□ 1.19
USP6NLQ92738 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC22.5■■□□□ 1.19
USP6NLQ92738 BX664615.1-201ENST00000443558 458 ntBASIC22.5■■□□□ 1.19
USP6NLQ92738 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC22.5■■□□□ 1.19
USP6NLQ92738 AC063952.2-201ENST00000498792 1227 ntBASIC22.5■■□□□ 1.19
USP6NLQ92738 KRT18P16-201ENST00000510337 1294 ntBASIC22.5■■□□□ 1.19
USP6NLQ92738 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC22.5■■□□□ 1.19
USP6NLQ92738 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
USP6NLQ92738 AC130371.2-201ENST00000619443 611 ntBASIC22.5■■□□□ 1.19
USP6NLQ92738 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
USP6NLQ92738 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
USP6NLQ92738 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
USP6NLQ92738 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
USP6NLQ92738 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC22.49■■□□□ 1.19
USP6NLQ92738 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
USP6NLQ92738 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
USP6NLQ92738 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
USP6NLQ92738 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms