Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cystm1Q8K353 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cystm1Q8K353 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cystm1Q8K353 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC10.76□□□□□ -0.69
Cystm1Q8K353 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC10.76□□□□□ -0.69
Cystm1Q8K353 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cystm1Q8K353 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC10.76□□□□□ -0.69
Cystm1Q8K353 CT030146.1-201ENSMUST00000220919 217 ntBASIC10.76□□□□□ -0.69
Cystm1Q8K353 Ap3s1-204ENSMUST00000225520 957 ntBASIC10.76□□□□□ -0.69
Cystm1Q8K353 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cystm1Q8K353 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cystm1Q8K353 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cystm1Q8K353 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cystm1Q8K353 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cystm1Q8K353 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cystm1Q8K353 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cystm1Q8K353 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cystm1Q8K353 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cystm1Q8K353 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cystm1Q8K353 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cystm1Q8K353 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cystm1Q8K353 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cystm1Q8K353 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cystm1Q8K353 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC10.76□□□□□ -0.69
Cystm1Q8K353 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cystm1Q8K353 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cystm1Q8K353 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cystm1Q8K353 Gm9954-202ENSMUST00000198686 4725 ntBASIC10.75□□□□□ -0.69
Cystm1Q8K353 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cystm1Q8K353 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cystm1Q8K353 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cystm1Q8K353 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cystm1Q8K353 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Cystm1Q8K353 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cystm1Q8K353 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Cystm1Q8K353 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cystm1Q8K353 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Cystm1Q8K353 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cystm1Q8K353 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC10.75□□□□□ -0.69
Cystm1Q8K353 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cystm1Q8K353 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cystm1Q8K353 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cystm1Q8K353 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cystm1Q8K353 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cystm1Q8K353 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Cystm1Q8K353 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cystm1Q8K353 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cystm1Q8K353 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cystm1Q8K353 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cystm1Q8K353 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cystm1Q8K353 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cystm1Q8K353 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC10.74□□□□□ -0.69
Cystm1Q8K353 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cystm1Q8K353 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cystm1Q8K353 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Cystm1Q8K353 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Cystm1Q8K353 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Cystm1Q8K353 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cystm1Q8K353 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cystm1Q8K353 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cystm1Q8K353 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cystm1Q8K353 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Cystm1Q8K353 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cystm1Q8K353 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cystm1Q8K353 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC10.74□□□□□ -0.69
Cystm1Q8K353 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
Cystm1Q8K353 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC10.74□□□□□ -0.69
Cystm1Q8K353 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cystm1Q8K353 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cystm1Q8K353 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cystm1Q8K353 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cystm1Q8K353 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Cystm1Q8K353 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Cystm1Q8K353 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cystm1Q8K353 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cystm1Q8K353 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cystm1Q8K353 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Cystm1Q8K353 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cystm1Q8K353 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cystm1Q8K353 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cystm1Q8K353 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cystm1Q8K353 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cystm1Q8K353 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cystm1Q8K353 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cystm1Q8K353 Gm10710-201ENSMUST00000047876 3971 ntBASIC10.74□□□□□ -0.69
Cystm1Q8K353 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cystm1Q8K353 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cystm1Q8K353 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
Cystm1Q8K353 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC10.73□□□□□ -0.69
Cystm1Q8K353 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Cystm1Q8K353 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cystm1Q8K353 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cystm1Q8K353 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cystm1Q8K353 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC10.73□□□□□ -0.69
Cystm1Q8K353 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Cystm1Q8K353 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
Cystm1Q8K353 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cystm1Q8K353 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cystm1Q8K353 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cystm1Q8K353 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms